stephenturner / annotablesLinks
R data package for annotating/converting Gene IDs
☆163Updated 2 years ago
Alternatives and similar repositories for annotables
Users that are interested in annotables are comparing it to the libraries listed below
Sorting:
- Power analysis is essential to optimize the design of RNA-seq experiments and to assess and compare the power to detect differentially ex…☆106Updated last year
- make enriched heatmap which visualizes the enrichment of genomic signals to specific target regions.☆190Updated last year
- Data from Lewis, Barnes, Blighe et al., Cell Rep. 2019 Aug 27; 28(9): 2455–2470.e5.☆121Updated 5 years ago
- An R interface to enrichR☆92Updated 4 months ago
- ☆72Updated 3 years ago
- MSigDB gene sets for multiple organisms in a tidy data format☆76Updated 3 weeks ago
- Brings bulk and pseudobulk transcriptomics to the tidyverse☆172Updated last month
- Code for biostar tutorials - mostly R and Perl☆50Updated 10 months ago
- Olink R package: A collection of functions to facilitate analysis of proteomic data from Olink. The goal of this package is to help users…☆110Updated this week
- Co-Expression Module Identification Tool (CEMiTool) official repository☆22Updated last year
- Updated implementation of the GSEA-P R application for modern R distributions☆96Updated 3 years ago
- A SingleCell RNASeq pre-processing snakemake workflow☆149Updated 2 years ago
- R data package for pre-compiled somatic mutations from TCGA cohorts and CCLE☆93Updated 8 months ago
- Batch effects and the effective design of single-cell gene expression studies☆102Updated 5 years ago
- Integrated Differential Expression and Pathway analysis☆132Updated 2 weeks ago
- RNA-seq workflow: exploratory analysis and differential expression☆77Updated last year
- Course material for CSAMA: Statistical Data Analysis for Genome Scale Biology☆94Updated 11 months ago
- Generate IGV style locus tracks from bigWig files in R☆162Updated 7 months ago
- Create timecourse "fish plots" that show changes in the clonal architecture of tumors☆168Updated last year
- Clone of the Bioconductor repository for the scater package.☆96Updated 2 months ago
- Light-weight Snakemake workflow for preprocessing and statistical analysis of RNA-seq data☆165Updated 5 months ago
- An archived version of the scater repository, see https://github.com/davismcc/scater for the active version.☆64Updated 7 years ago
- Visualizing transcript structure and annotation using ggplot2☆156Updated 9 months ago
- Tutorials on accessing public reference and genomic data☆30Updated 3 months ago
- 🌲 An easy-to-use and scalable toolkit for genomic alteration signature (a.k.a. mutational signature) analysis and visualization in R htt…☆152Updated 7 months ago
- ☆62Updated last year
- R package for analyzing single-cell RNA-seq data☆175Updated last year
- Contribute Packages to Bioconductor☆138Updated last month
- A single cell RNA-seq workflow, including highly variable gene analysis, cell type assignment and differential expression analysis.☆101Updated 2 years ago
- A factor analysis package☆100Updated 13 years ago