stephenturner / annotables
R data package for annotating/converting Gene IDs
☆163Updated last year
Alternatives and similar repositories for annotables:
Users that are interested in annotables are comparing it to the libraries listed below
- Data from Lewis, Barnes, Blighe et al., Cell Rep. 2019 Aug 27; 28(9): 2455–2470.e5.☆118Updated 4 years ago
- Olink R package: A collection of functions to facilitate analysis of proteomic data from Olink. The goal of this package is to help users…☆100Updated this week
- ☆69Updated 3 years ago
- Power analysis is essential to optimize the design of RNA-seq experiments and to assess and compare the power to detect differentially ex…☆105Updated last year
- An R interface to enrichR☆81Updated last month
- Course material for CSAMA: Statistical Data Analysis for Genome Scale Biology☆92Updated 6 months ago
- Light-weight Snakemake workflow for preprocessing and statistical analysis of RNA-seq data☆161Updated last month
- Brings bulk and pseudobulk transcriptomics to the tidyverse☆166Updated last month
- Code for biostar tutorials - mostly R and Perl☆50Updated 5 months ago
- make enriched heatmap which visualizes the enrichment of genomic signals to specific target regions.☆189Updated 10 months ago
- Co-Expression Module Identification Tool (CEMiTool) official repository☆21Updated 10 months ago
- An archived version of the scater repository, see https://github.com/davismcc/scater for the active version.☆64Updated 7 years ago
- The bridge between the NCBI Gene Expression Omnibus and Bioconductor☆90Updated 2 months ago
- EDA, QC, and DESeq2 / edgeR analysis of 109 RNA-seq samples of immunotherapy treatment☆53Updated last year
- Integrated Differential Expression and Pathway analysis☆127Updated 2 months ago
- The package wrapping the book, for deployment via the Bioconductor build system.☆84Updated 2 months ago
- ☆57Updated 8 months ago
- A SingleCell RNASeq pre-processing snakemake workflow☆146Updated 2 years ago
- Batch effects and the effective design of single-cell gene expression studies☆100Updated 5 years ago
- Visualizing transcript structure and annotation using ggplot2☆133Updated 4 months ago
- RNA-seq workflow: exploratory analysis and differential expression☆73Updated last year
- Publication-quality sequence logos in R☆210Updated 3 months ago
- Easily install and load packages from the tidyomcis ecosystem☆63Updated 10 months ago
- A factor analysis package☆97Updated 12 years ago
- Bioconductor workshop: Analysis of single-cell RNA-seq data with R and Bioconductor☆78Updated 8 years ago
- R data package for pre-compiled somatic mutations from TCGA cohorts and CCLE☆90Updated 3 months ago
- Contribute Packages to Bioconductor☆135Updated last year
- Generate IGV style locus tracks from bigWig files in R☆153Updated 2 months ago
- Quantify and interpret divers of variation in multilevel gene expression experiments☆60Updated last week
- Make Interactive Complex Heatmaps☆130Updated 10 months ago