stephenturner / annotablesLinks
R data package for annotating/converting Gene IDs
☆166Updated 4 months ago
Alternatives and similar repositories for annotables
Users that are interested in annotables are comparing it to the libraries listed below
Sorting:
- make enriched heatmap which visualizes the enrichment of genomic signals to specific target regions.☆198Updated last year
- Light-weight Snakemake workflow for preprocessing and statistical analysis of RNA-seq data☆165Updated last month
- Data from Lewis, Barnes, Blighe et al., Cell Rep. 2019 Aug 27; 28(9): 2455–2470.e5.☆121Updated 5 years ago
- Contribute Packages to Bioconductor☆143Updated 7 months ago
- Olink R package: A collection of functions to facilitate analysis of proteomic data from Olink. The goal of this package is to help users…☆121Updated this week
- Power analysis is essential to optimize the design of RNA-seq experiments and to assess and compare the power to detect differentially ex…☆107Updated 2 years ago
- An R interface to enrichR☆93Updated 9 months ago
- Create timecourse "fish plots" that show changes in the clonal architecture of tumors☆171Updated 2 years ago
- Course material for CSAMA: Statistical Data Analysis for Genome Scale Biology☆94Updated last year
- 🌲 An easy-to-use and scalable toolkit for genomic alteration signature (a.k.a. mutational signature) analysis and visualization in R htt…☆157Updated 2 months ago
- Publication-quality sequence logos in R☆225Updated last year
- Brings bulk and pseudobulk transcriptomics to the tidyverse☆174Updated this week
- Clone of the Bioconductor repository for the scater package.☆96Updated 8 months ago
- A SingleCell RNASeq pre-processing snakemake workflow☆148Updated 2 years ago
- Integrated Differential Expression and Pathway analysis☆133Updated last week
- Make Interactive Complex Heatmaps☆138Updated last year
- Transcript quantification import for modular pipelines☆141Updated last month
- R data package for pre-compiled somatic mutations from TCGA cohorts and CCLE☆98Updated last year
- Visualizing transcript structure and annotation using ggplot2☆161Updated last year
- Batch effects and the effective design of single-cell gene expression studies☆104Updated 6 years ago
- Devel repository for minfi☆61Updated last year
- R package for analyzing single-cell RNA-seq data☆176Updated last year
- Tools for processing UMI RNA-tag data☆131Updated 2 years ago
- An archived version of the scater repository, see https://github.com/davismcc/scater for the active version.☆64Updated 8 years ago
- Tutorials on accessing public reference and genomic data☆30Updated 8 months ago
- A single cell RNA-seq workflow, including highly variable gene analysis, cell type assignment and differential expression analysis.☆103Updated 2 years ago
- Code for biostar tutorials - mostly R and Perl☆50Updated last year
- ☆73Updated 3 years ago
- A factor analysis package☆102Updated 13 years ago
- Updated implementation of the GSEA-P R application for modern R distributions☆97Updated 3 years ago