stephenturner / annotables
R data package for annotating/converting Gene IDs
☆163Updated 2 years ago
Alternatives and similar repositories for annotables:
Users that are interested in annotables are comparing it to the libraries listed below
- Data from Lewis, Barnes, Blighe et al., Cell Rep. 2019 Aug 27; 28(9): 2455–2470.e5.☆119Updated 4 years ago
- make enriched heatmap which visualizes the enrichment of genomic signals to specific target regions.☆190Updated last year
- Power analysis is essential to optimize the design of RNA-seq experiments and to assess and compare the power to detect differentially ex…☆106Updated last year
- Brings bulk and pseudobulk transcriptomics to the tidyverse☆171Updated this week
- An R interface to enrichR☆90Updated last month
- ☆71Updated 3 years ago
- Light-weight Snakemake workflow for preprocessing and statistical analysis of RNA-seq data☆162Updated 3 months ago
- MSigDB gene sets for multiple organisms in a tidy data format☆73Updated this week
- Course material for CSAMA: Statistical Data Analysis for Genome Scale Biology☆92Updated 8 months ago
- Create timecourse "fish plots" that show changes in the clonal architecture of tumors☆166Updated last year
- Contribute Packages to Bioconductor☆136Updated last month
- The package wrapping the book, for deployment via the Bioconductor build system.☆83Updated 4 months ago
- Co-Expression Module Identification Tool (CEMiTool) official repository☆22Updated last year
- Code for biostar tutorials - mostly R and Perl☆50Updated 7 months ago
- Publication-quality sequence logos in R☆211Updated 5 months ago
- Visualizing transcript structure and annotation using ggplot2☆149Updated 6 months ago
- R data package for pre-compiled somatic mutations from TCGA cohorts and CCLE☆92Updated 5 months ago
- Clone of the Bioconductor repository for the scater package.☆96Updated 2 weeks ago
- A SingleCell RNASeq pre-processing snakemake workflow☆147Updated 2 years ago
- Olink R package: A collection of functions to facilitate analysis of proteomic data from Olink. The goal of this package is to help users…☆107Updated this week
- Simplify functional enrichment results☆113Updated 6 months ago
- A factor analysis package☆99Updated 12 years ago
- Batch effects and the effective design of single-cell gene expression studies☆100Updated 5 years ago
- The bridge between the NCBI Gene Expression Omnibus and Bioconductor☆92Updated 4 months ago
- Statistical Analysis of RNA-Seq Tools☆107Updated last year
- RNA-seq workflow: exploratory analysis and differential expression☆76Updated last year
- Tutorials on accessing public reference and genomic data☆31Updated last month
- Quantify and interpret divers of variation in multilevel gene expression experiments☆62Updated 2 months ago
- Generate IGV style locus tracks from bigWig files in R☆155Updated 4 months ago
- Make Interactive Complex Heatmaps☆134Updated last year