stephenturner / annotablesLinks
R data package for annotating/converting Gene IDs
☆166Updated last month
Alternatives and similar repositories for annotables
Users that are interested in annotables are comparing it to the libraries listed below
Sorting:
- Light-weight Snakemake workflow for preprocessing and statistical analysis of RNA-seq data☆165Updated 8 months ago
- make enriched heatmap which visualizes the enrichment of genomic signals to specific target regions.☆193Updated last year
- Power analysis is essential to optimize the design of RNA-seq experiments and to assess and compare the power to detect differentially ex…☆106Updated 2 years ago
- Contribute Packages to Bioconductor☆141Updated 3 months ago
- Data from Lewis, Barnes, Blighe et al., Cell Rep. 2019 Aug 27; 28(9): 2455–2470.e5.☆122Updated 5 years ago
- Brings bulk and pseudobulk transcriptomics to the tidyverse☆174Updated last week
- 🌲 An easy-to-use and scalable toolkit for genomic alteration signature (a.k.a. mutational signature) analysis and visualization in R htt…☆153Updated 9 months ago
- Olink R package: A collection of functions to facilitate analysis of proteomic data from Olink. The goal of this package is to help users…☆113Updated this week
- An R interface to enrichR☆91Updated 6 months ago
- Publication-quality sequence logos in R☆216Updated 9 months ago
- Create timecourse "fish plots" that show changes in the clonal architecture of tumors☆169Updated last year
- Course material for CSAMA: Statistical Data Analysis for Genome Scale Biology☆94Updated last year
- Clone of the Bioconductor repository for the scater package.☆96Updated 4 months ago
- An archived version of the scater repository, see https://github.com/davismcc/scater for the active version.☆64Updated 7 years ago
- ☆72Updated 3 years ago
- Batch effects and the effective design of single-cell gene expression studies☆102Updated 6 years ago
- Visualizing transcript structure and annotation using ggplot2☆158Updated 11 months ago
- Integrated Differential Expression and Pathway analysis☆132Updated last week
- R package for analyzing single-cell RNA-seq data☆175Updated last year
- Transcript quantification import for modular pipelines☆141Updated last month
- Make Interactive Complex Heatmaps☆137Updated last year
- A SingleCell RNASeq pre-processing snakemake workflow☆148Updated 2 years ago
- Bioconductor workshop: Analysis of single-cell RNA-seq data with R and Bioconductor☆79Updated 8 years ago
- The bridge between the NCBI Gene Expression Omnibus and Bioconductor☆98Updated 3 weeks ago
- A factor analysis package☆100Updated 13 years ago
- PolyFun (POLYgenic FUNctionally-informed fine-mapping)☆122Updated 7 months ago
- EDA, QC, and DESeq2 / edgeR analysis of 109 RNA-seq samples of immunotherapy treatment☆56Updated 2 years ago
- Generic Java genotype reader / writer, QTL mapping software, Strand alignment tool☆173Updated 7 months ago
- Tools for processing UMI RNA-tag data☆131Updated 2 years ago
- Moderator Templates for https://www.biostars.org/☆11Updated 4 years ago