MyersGroup / testisAtlas
Code used for mouse single cell RNAseq testis atlas
☆12Updated 4 years ago
Alternatives and similar repositories for testisAtlas:
Users that are interested in testisAtlas are comparing it to the libraries listed below
- Method for identifying trait-relevant gene annotations from GWAS summary statistics.☆17Updated 2 years ago
- Toolkit for metacell analysis☆14Updated 6 months ago
- MultiSKAT is an R-package focused at rare-variant analysis of continuous multiple phenotype data. This project contains the R-codes/funct…☆11Updated 5 years ago
- R interface to genome annotation files and the UCSC genome browser☆31Updated 2 weeks ago
- Code associated with MIX-seq manuscript☆14Updated 4 years ago
- Code for EpiMap data browser☆14Updated 9 months ago
- 🧬 🦀 A fast and efficient tool to perform a genome wide Single cell Chromatin State Analysis using multimodal histone modification data.…☆26Updated 3 years ago
- Bead-based single-cell atac processing☆31Updated 3 years ago
- A method to rapidly assess cell type identity using both functional and random gene sets☆13Updated 5 years ago
- Using Bulk Gene Expression to Estimate Cell-Type-Specific Gene Expression via Deconvolution☆44Updated last year
- Code and data resources accompanying Urbut et al (2017), "Flexible statistical methods for estimating and testing effects in genomic stud…☆24Updated last year
- Benchmarking gene and variant prioritization algorithms for GWAS data☆15Updated 5 years ago
- Code for creating cell-type-specific regulatory element annotation files☆18Updated 8 months ago
- An R package for visualising cell-cell interactions☆43Updated 6 months ago
- Single cell interactive plotting tools☆23Updated 4 years ago
- GWAS gold standards repository☆32Updated last year
- Batch Effect Correction of RNA-seq Data through Sample Distance Matrix Adjustment☆17Updated 3 years ago
- RSS-NET: Regression with Summary Statistics exploiting Network Topology☆18Updated 5 months ago
- An R package for multi-dimensional pathway enrichment analysis☆16Updated 3 months ago
- Allele-Specific Expression by Single-Cell RNA Sequencing☆28Updated 4 years ago
- ☆20Updated last week
- Mean Alterations Using Discrete Expression☆14Updated 10 months ago
- Repository for supplemental material of manuscripts☆18Updated 3 years ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆28Updated 7 months ago
- R/BioC package to estimate the cell composition of whole blood in DNA methylation samples in microarray or sequencing platforms☆19Updated 2 years ago
- ☆14Updated 5 years ago
- R package for benchmarking single cell analysis methods☆30Updated last year
- The official repository of the Bioconductor 2019 Conference Workshops☆25Updated last year
- ☆12Updated 9 months ago
- Classes for storing very large GWAS data sets and annotation, and functions for GWAS data cleaning and analysis☆17Updated 4 months ago