shorvath / MammalianMethylationConsortiumLinks
DNA methylation studies of mammalian species
☆37Updated 2 months ago
Alternatives and similar repositories for MammalianMethylationConsortium
Users that are interested in MammalianMethylationConsortium are comparing it to the libraries listed below
Sorting:
- EasyFuse is a pipeline for accurate fusion gene detection from RNA-seq data.☆62Updated 2 weeks ago
- A list of alternative splicing analysis resources☆46Updated 7 months ago
- Time-Course Multi-Omics data integration☆25Updated last year
- Workflows for processing RNA data for germline short variant discovery with GATK v4 and related tools☆80Updated 4 years ago
- A continually expanding collection of RNA-seq tools☆52Updated 3 weeks ago
- RepEnrich2 is an updated method to estimate repetitive element enrichment using high-throughput sequencing data.☆41Updated 3 years ago
- Single-cell/nuclei pipeline for data derived from Oxford Nanopore and 10X Genomics☆50Updated last week
- A Perl/R pipeline for plotting metagenes☆37Updated 4 years ago
- Public repository containing research code for the TCGA PanCanAtlas Splicing project☆42Updated 4 years ago
- MutSig2CV from Lawrence et al. 2014☆33Updated 5 years ago
- RNAseq pipeline based on snakemake☆26Updated 2 years ago
- Identifying genome-wide translated open reading frames using ribosome profiling☆23Updated 2 years ago
- Detecting intron retention from RNA-Seq experiments☆55Updated last year
- Full-length transcriptome splicing and mutation analysis☆84Updated last year
- Comprehensive analysis of small RNA sequencing data☆33Updated 5 months ago
- Rapid analysis and visualisation for bulk RNA-seq, psuedo-bulk RNA-seq, GeoMx and Proteomic datasets.☆30Updated last year
- Single cell Nanopore sequencing data for Genotype and Phenotype☆54Updated 5 months ago
- A pipeline for identifying indel derived neoantigens using RNA-Seq data☆30Updated 3 years ago
- ☆39Updated 5 years ago
- A bioinformatics pipeline for viral transcriptome detection and quantification considering splicing.☆35Updated 3 years ago
- A statistical tool to detect differential alternative splicing events using single-cell RNA-seq☆22Updated 2 years ago
- Genomic Identification of Significant Targets in Cancer (GISTIC), version 2☆52Updated 3 years ago
- An R interface to the MEME Suite☆52Updated 4 months ago
- Convert Counts to Fragments per Kilobase of Transcript per Million (FPKM)☆62Updated 4 years ago
- A modular, containerized pipeline for ATAC-seq data processing☆60Updated last month
- A tool for the calculation of RNA-editing index for RNA seq data☆45Updated last week
- From RNA-seq raw reads to enriched pathways by DEGs☆32Updated last year
- Ribo-seq TIS Hunter, predicting translation initiation sites and ORFs using riboseq data☆43Updated last week
- A script to make downloading of SRA/GEO data easier☆31Updated 2 years ago
- ☆59Updated 3 months ago