Alternatives and similar repositories for IDP-LM

Users that are interested in IDP-LM are comparing it to the libraries listed below

• babaling / DRPreter
  [IJMS 2022] DRPreter: Interpretable Anticancer Drug Response Prediction Using Knowledge-Guided Graph Neural Networks and Transformer
  ☆10Updated 2 years ago
• FangpingWan / DeepCPI
  ☆17Updated 5 years ago
• yuanweining / FusionDTA
  ☆21Updated last year
• IBM / ReprogBERT
  Code for ICML 2023 paper "Reprogramming Pretrained Language Models for Antibody Sequence Infilling"
  ☆24Updated last week
• papercode-for-cheung / DeepMGT-DTI
  ☆16Updated 3 years ago
• RL4M / KeAP
  An official implementation of Protein Representation Learning via Knowledge Enhanced Primary Structure Reasoning
  ☆29Updated 2 years ago
• 595693085 / WGNN-DTA
  a method for CPI and DTA prediction
  ☆11Updated 3 years ago
• Shen-Lab / CPAC
  [Bioinformatics 2022] Cross-Modality and Self-Supervised Protein Embedding for Compound-Protein Affinity and Contact Prediction
  ☆16Updated last year
• mamei1016 / DGNN-DDI
  source for paper DGNN-DDI
  ☆10Updated last year
• WeiLab-Biology / DeepProSite
  ☆34Updated last year
• CMACH508 / AlphaDrug
  AlphaDrug: Protein Target Specific De Novo Molecular Generation
  ☆40Updated 2 years ago
• wzn99 / DrugPilot
  A LLM agent framework for drug discovery
  ☆17Updated 2 months ago
• zhaoqichang / AttentionDTA_BIBM
  AttentionDTA: prediction of drug–target binding affinity using attention model.https://ieeexplore.ieee.org/abstract/document/8983125
  ☆13Updated 5 years ago
• UniBind / UniBind
  ☆35Updated 2 years ago
• MahaThafar / Drug-Target-Interaction-Prediciton-Method
  This repository provides an implementation of the DTiGEMSplus tool, a network-based method for computational Drug-Target Interaction pred…
  ☆27Updated 3 years ago
• liugangcode / InfoAlign
  The code for "Learning Molecular Representation in a Cell"
  ☆36Updated 6 months ago
• CSUBioGroup / BACPI
  A bi-directional attention neural network for compound–protein interaction and binding affinity prediction.
  ☆32Updated 2 years ago
• ZhonghuiGu / HEAL
  ☆55Updated last year
• NasimAbdollahi / NodeCoder
  NodeCoder is a general framework based on graph convolutional neural network for protein function prediction.
  ☆33Updated last year
• GIST-CSBL / HoTS
  HoTS: Sequence-based prediction of binding regions and drug-target interactions.
  ☆27Updated 2 years ago
• bm2-lab / X-MOL
  ☆36Updated 3 years ago
• biomed-AI / GraphPPIS
  ☆53Updated last year
• Eikor / InstructPLM
  The first large protein language model trained follows structure instructions.
  ☆84Updated 4 months ago
• CSUBioGroup / DeepPPISP
  Protein-protein interaction sites prediction through combining local and global features with deep neural networks
  ☆54Updated 5 years ago
• PaccMann / paccmann_proteomics
  PaccMann models for protein language modeling
  ☆43Updated 3 years ago
• Shen-Lab / Drug-Combo-Generator
  Deep Generative Models for Drug Combination (Graph Set) Generation given Hierarchical Disease Network Embedding
  ☆30Updated 2 years ago
• idrugLab / ADCNet
  ☆21Updated 4 months ago
• gozsari / ProtFeat
  ProtFeat is protein feature extraction tool that utilizes POSSUM and iFeature.
  ☆20Updated last year
• biomed-AI / GraphSite
  GraphSite: protein-DNA binding site prediction using graph transformer and predicted protein structures
  ☆60Updated last year
• ak422 / DDAffinity
  ☆22Updated 4 months ago