YihePang / IDP-LM
Computational predictor of protein intrinsic disorder and its functions
☆10Updated last year
Alternatives and similar repositories for IDP-LM:
Users that are interested in IDP-LM are comparing it to the libraries listed below
- ☆17Updated 4 years ago
- AttentionDTA: prediction of drug–target binding affinity using attention model.https://ieeexplore.ieee.org/abstract/document/8983125☆13Updated 4 years ago
- source for paper DGNN-DDI☆10Updated last year
- A bi-directional attention neural network for compound–protein interaction and binding affinity prediction.☆30Updated 2 years ago
- ☆32Updated last year
- SSM-DTA: Breaking the Barriers of Data Scarcity in Drug-Target Affinity Prediction (Briefings in Bioinformatics 2023)☆52Updated 10 months ago
- a method for CPI and DTA prediction☆10Updated 2 years ago
- ☆18Updated last year
- An official implementation of Protein Representation Learning via Knowledge Enhanced Primary Structure Reasoning☆28Updated last year
- A unified framework for predicting drug-target interactions, binding affinities and activation/inhibition mechanisms.☆31Updated 2 months ago
- ☆32Updated 2 years ago
- DeepCDA☆14Updated 5 years ago
- ☆16Updated 3 years ago
- BridgeDPI: A Novel Graph Neural Network for Predicting Drug-Protein Interactions☆19Updated 3 months ago
- [ACL 2024] ProtLLM: An Interleaved Protein-Language LLM with Protein-as-Word Pre-Training☆45Updated last year
- Implementation of ICLR23 paper "Molecule Generation for Target Protein Binding with Structural Motifs"☆64Updated last year
- Protein-protein interaction sites prediction through combining local and global features with deep neural networks☆54Updated 5 years ago
- Bioinformatics'2022 PerceiverCPI: A nested cross-attention network for compound-protein interaction prediction☆35Updated last year
- PocketDTA☆28Updated 5 months ago
- [RECOMB 2023] Official implementation of "Pisces: A combo-wise contrastive learning approach to synergistic drug combination prediction".☆14Updated last year
- A novel graph neural network strategy with the Vina distance optimization terms to predict protein-ligand binding affinity☆31Updated 11 months ago
- PyTorch code for KDD 2023 paper "Pre-training Antibody Language Models for Antigen-Specific Computational Antibody Design"☆50Updated last year
- Implementation of GEFA: Early Fusion Approach in Drug-Target Affinity Prediction☆20Updated 4 years ago
- Multi-modal co-attention for drug-target interaction annotation and Its Application to SARS-CoV-2☆17Updated 2 years ago
- ☆51Updated 7 months ago
- ☆34Updated 3 years ago
- InterpretableDTIP☆20Updated 6 years ago
- The first large protein language model trained follows structure instructions.☆79Updated 10 months ago
- ☆30Updated 3 years ago
- InteractionGraphNet: a Novel and Efficient Deep Graph Representation Learning Framework for Accurate Protein-Ligand Interaction Predictio…☆30Updated 3 years ago