Alternatives and similar repositories for genetics-gold-standards:

Users that are interested in genetics-gold-standards are comparing it to the libraries listed below

• ericminikel / genetic_support
  Refining the impact of genetic evidence on clinical success
  ☆25Updated 9 months ago
• Genentech / midasHLA
  R package enabling statistical association analysis and using immunogenetic data transformation functions for HLA amino acid fine mapping…
  ☆12Updated last year
• xqwen / dap
  software package for integrative genetic association analysis
  ☆34Updated last year
• immunogenomics / IMPACT
  Code for creating cell-type-specific regulatory element annotation files
  ☆18Updated 10 months ago
• dcalderon / rolypoly
  Method for identifying trait-relevant gene annotations from GWAS summary statistics.
  ☆17Updated 2 years ago
• richardslab / Ei
  Data and code for the Effector index
  ☆13Updated 4 years ago
• karltayeb / cafeh
  ☆13Updated 2 years ago
• ajaynadig / bhr
  Suite of heritability and genetic correlation estimation tools for exome-sequencing data
  ☆33Updated 2 months ago
• Kyoko-wtnb / FUMA_scRNA_data
  Descriptions/scripts for pre-process and processed data for FUMA cell specificity analyses (scRNA-seq)
  ☆23Updated 5 years ago
• cboix / epimap_vis
  Code for EpiMap data browser
  ☆14Updated 11 months ago
• sigven / oncoEnrichR
  Explore the cancer relevance of your gene list
  ☆51Updated 2 months ago
• SUwonglab / rss-net
  RSS-NET: Regression with Summary Statistics exploiting Network Topology
  ☆18Updated last week
• Townsend-Lab-Yale / cancereffectsizeR
  cancereffectsizeR: Estimate somatic mutation rates and quantify selection in cancer
  ☆18Updated 3 weeks ago
• RebeccaFine / benchmarker
  Benchmarking gene and variant prioritization algorithms for GWAS data
  ☆15Updated 5 years ago
• Simon-Coetzee / motifBreakR
  A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.
  ☆29Updated 9 months ago
• rivas-lab / public-resources
  Repository for resources we'd like to share with the community.
  ☆24Updated 3 years ago
• montilab / BS831
  Course Materials for Genomics Data Mining
  ☆22Updated 3 months ago
• Nealelab / UKBB_ldsc
  Sample code for ldsc analyses in UKBB
  ☆30Updated 2 years ago
• leekgroup / networks_correction
  Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"
  ☆16Updated 6 years ago
• dan-landau / IronThrone-GoT
  processes GoT amplicon data and generates a table of metrics
  ☆29Updated 2 years ago
• opentargets / genetics-colocalisation
  Colocalisation pipeline for Open Targets Genetics
  ☆17Updated 3 years ago
• diptavo / MultiSKAT
  MultiSKAT is an R-package focused at rare-variant analysis of continuous multiple phenotype data. This project contains the R-codes/funct…
  ☆11Updated 5 years ago
• eQTL-Catalogue / eQTL-Catalogue-resources
  ☆46Updated 6 months ago
• FinucaneLab / gene_features
  ☆33Updated last year
• xinhe-lab / ctwas
  package for the causal TWAS project
  ☆41Updated this week
• douglasyao / mesc
  Mediated Expression Score Regression (MESC)
  ☆26Updated 2 years ago
• Papatheodorou-Group / CATD_snakemake
  Snakemake pipeline for benchmarking cell-type deconvolution methods and deconvolving real bulk RNA-seq data with the use of scRNA-seq dat…
  ☆15Updated last week
• boxiangliu / locuscompare
  LocusCompare is an interactive visualization tool for comparing two genetic association datasets.
  ☆21Updated 2 years ago
• hms-dbmi / scw
  HSCI/Catalyst Single-cell RNA-Seq Workshop
  ☆19Updated 6 years ago
• de-Boer-Lab / MAUDE
  Mean Alterations Using Discrete Expression
  ☆14Updated last year