interactivereport / xOmicsShinyLinks
R Shiny application for cross omics data analysis. In revision with Bioinformatics Adv.
☆30Updated last month
Alternatives and similar repositories for xOmicsShiny
Users that are interested in xOmicsShiny are comparing it to the libraries listed below
Sorting:
- Explore the cancer relevance of your gene list☆51Updated 3 months ago
- Snakemake pipeline for running MAJIQ☆23Updated last year
- Immune Cell Gene Signatures for Profiling the Microenvironment of Solid Tumours☆27Updated 4 years ago
- BingleSeq - A user-friendly R package for Bulk and Single-cell RNA-Seq data analyses☆21Updated 3 years ago
- Inference of TCR motifs☆30Updated last month
- A Shiny web server for interactive visualization and analysis of RNA-seq data☆23Updated 4 years ago
- Please consider using/contributing to https://github.com/nf-core/scdownstream☆25Updated 11 months ago
- Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆16Updated 3 years ago
- ☆28Updated last year
- Pipeline to call neoantigens from intron retention events derived from RNA-Seq data.☆28Updated 4 years ago
- Batch Correction and Adaptive Contrast Calling in Complex RNA-seq Experimental Designs Using DESeq2☆15Updated last month
- Isoform-level functional RNA-Seq analysis 🧬☆25Updated this week
- ☆19Updated last year
- Toolkit for benchmarking fusion transcript predictions☆19Updated 9 months ago
- ☆36Updated 10 months ago
- Single-cell/nuclei RNA-seq analysis tools in R for a complete workflow.☆56Updated last year
- Interactive R package to quantify, analyse and visualise alternative splicing☆37Updated this week
- This repostory contains codes for Shimada et al., "A tool for browsing the Cancer Dependency Map reveals functional connections between g…☆13Updated 3 years ago
- ☆24Updated 2 years ago
- repository for the single cell RNA-Seq workshop☆29Updated 4 years ago
- The Spatial Splicing-derived Neoantigen Identifier Pipeline (SSNIP) allows for the precise characterization of neoantigens derived from c…☆19Updated last month
- ☆12Updated last year
- GREIN : GEO RNA-seq Experiments Interactive Navigator☆49Updated 6 years ago
- SpaceX: Gene Co-expression Network Estimation for Spatial Transcriptomics☆19Updated 2 years ago
- A pipeline for identifying indel derived neoantigens using RNA-Seq data☆30Updated 2 years ago
- Bioinformatics for Benched Biologists☆22Updated 5 years ago
- ☆24Updated 10 months ago
- Explore and download data from the recount3 project☆35Updated 3 weeks ago
- processes GoT amplicon data and generates a table of metrics☆29Updated 2 years ago
- COMPSRA: a COMprehensive Platform for Small RNA-Seq data Analysis☆16Updated 4 years ago