TheJacksonLaboratory / JAXBD2K-ShortCourseLinks
This repository contains course materials from JAX-BD2K workshop.
☆32Updated 6 years ago
Alternatives and similar repositories for JAXBD2K-ShortCourse
Users that are interested in JAXBD2K-ShortCourse are comparing it to the libraries listed below
Sorting:
- Website for the precision medicine workshop☆45Updated 2 weeks ago
- Genomic data interpretation and visualization Workshop☆21Updated 2 weeks ago
- Bioinformatics analysis scripts, workflows, general code examples☆54Updated 4 years ago
- ☆35Updated 4 years ago
- deepStats: a stastitical toolbox for deeptools and genomic signals☆34Updated 4 years ago
- Workshop • Analysis of RNA-seq data☆36Updated last year
- A standalone interactive application for detecting biological significance on a set of genes☆40Updated 4 years ago
- Provides Quality Control of sequencing samples by deducing if there is batch effect and adjusts for it.☆35Updated last year
- Full-spectrum copy number variation detection by high-throughput DNA sequencing☆37Updated 3 years ago
- COMPSRA: a COMprehensive Platform for Small RNA-Seq data Analysis☆16Updated 4 years ago
- A BioWDL pipeline for processing RNA-seq data, starting with FASTQ files to produce expression measures and VCFs. Category:Multi-Sample☆32Updated 2 years ago
- 📊Evaluating, filtering, comparing, and visualising VCF☆28Updated 2 years ago
- An interactive web-tool for RNA-seq analysis☆68Updated 5 months ago
- ☆33Updated 3 years ago
- RNAseq pipeline based on snakemake☆26Updated 2 years ago
- Tutorials covering various topics in genomic data analysis.☆17Updated 6 years ago
- This github repository contains code to reproduce the analysis in our paper "Variability in estimated gene expression among commonly used…☆28Updated last year
- ☆29Updated 5 years ago
- Classifies genes as an oncogene, tumor suppressor gene, or as a non-driver gene by using Random Forests☆49Updated last year
- Tool for RNA-Seq analysis.☆39Updated 3 years ago
- A R package and executable for the preprocessing, statistical analysis, and downstream testing and visualization of differentially methyl…☆44Updated last year
- Scripts to run copynumber variation calls on tumor and normal BAM files using Varscan2☆29Updated 7 years ago
- Identifying recurrent mutations in cancer☆37Updated 4 years ago
- A collection of resources to filter 'bad' probes from the Illumina 450k and EPIC methylation arrays☆30Updated last year
- Support code for NGS copy number algorithms. Takes a file of locations and a [cr|b]am file and generates a count of coverage of each alle…☆45Updated 2 years ago
- documentation for trackViewer☆29Updated 6 years ago
- R package for bcbio RNA-seq analysis.☆62Updated 10 months ago
- OUTRIDER: OUTlier in RNA-seq fInDER is an R-based framework to find aberrantly expressed genes in RNA-seq data☆53Updated last week
- ☆50Updated 4 years ago
- A continually expanding collection of RNA-seq tools☆51Updated 9 months ago