TheJacksonLaboratory / JAXBD2K-ShortCourseLinks
This repository contains course materials from JAX-BD2K workshop.
☆32Updated 6 years ago
Alternatives and similar repositories for JAXBD2K-ShortCourse
Users that are interested in JAXBD2K-ShortCourse are comparing it to the libraries listed below
Sorting:
- Website for the precision medicine workshop☆46Updated last month
- Genomic data interpretation and visualization Workshop☆21Updated last month
- Bioinformatics analysis scripts, workflows, general code examples☆54Updated 4 years ago
- deepStats: a stastitical toolbox for deeptools and genomic signals☆35Updated 4 years ago
- A standalone interactive application for detecting biological significance on a set of genes☆40Updated 4 years ago
- A snakemake pipeline for 10X genomics cellranger☆22Updated 2 months ago
- Mutational signature analysis for low statistics SNV data☆64Updated last year
- DRAGEN Tumor/Normal workflow post-processing☆25Updated 2 years ago
- An interactive web-tool for RNA-seq analysis☆70Updated 2 weeks ago
- Full-spectrum copy number variation detection by high-throughput DNA sequencing☆40Updated 4 years ago
- Clinical interpretation of somatic mutations in cancer☆50Updated 10 months ago
- ☆29Updated 6 years ago
- High-intensity sequencing reveals the sources of plasma circulating cell-free DNA variants☆22Updated 5 years ago
- Tool for parsing outputs from fusion detection tools. Part of a nf-core/rnafusion pipeline. Checkout a live demo at https://matq007.githu…☆28Updated 6 months ago
- A R package and executable for the preprocessing, statistical analysis, and downstream testing and visualization of differentially methyl…☆48Updated 2 years ago
- A continually expanding collection of RNA-seq tools☆53Updated 2 months ago
- 📊Evaluating, filtering, comparing, and visualising VCF☆28Updated 2 years ago
- Create regional association plots from GWAS or meta-analysis☆61Updated 5 years ago
- COMPSRA: a COMprehensive Platform for Small RNA-Seq data Analysis☆17Updated 4 years ago
- Nextflow RNA-Seq Best Practice analysis pipeline, used at the SciLifeLab National Genomics Infrastructure.☆51Updated 7 years ago
- ☆35Updated 5 years ago
- ☆33Updated 3 years ago
- Support code for NGS copy number algorithms. Takes a file of locations and a [cr|b]am file and generates a count of coverage of each alle…☆44Updated 3 years ago
- documentation for trackViewer☆29Updated 6 years ago
- A BioWDL pipeline for processing RNA-seq data, starting with FASTQ files to produce expression measures and VCFs. Category:Multi-Sample☆33Updated 2 years ago
- Interactive R package to quantify, analyse and visualise alternative splicing☆37Updated 3 weeks ago
- Filters for false-positive mutation calls in NGS☆34Updated 6 years ago
- A collection of resources to filter 'bad' probes from the Illumina 450k and EPIC methylation arrays☆30Updated 2 years ago
- Tool for RNA-Seq analysis.☆39Updated 3 years ago
- Disambiguation algorithm for reads aligned to human and mouse genomes using Tophat or BWA mem☆31Updated 7 years ago