MaayanLab / HarmonizomePythonScriptsLinks
☆26Updated 5 months ago
Alternatives and similar repositories for HarmonizomePythonScripts
Users that are interested in HarmonizomePythonScripts are comparing it to the libraries listed below
Sorting:
- CMap Notebooks for LINCS 2020 Workshop☆47Updated 4 years ago
- Connectivity Map analysis in MATLAB☆46Updated 3 years ago
- Python package to load and query ARCHS4 data☆24Updated 3 months ago
- Functional Embedding of Gene Signatures☆48Updated last year
- Epitope immunogenicity prediction through in silico TCR-peptide contact potential profiling.☆24Updated 2 years ago
- Knowledge-primed neural networks☆38Updated 2 years ago
- Preprocessing methylation pipeline, written in python. Easy to use and highly parallelized.☆36Updated 5 years ago
- High-Dimensional Gene Expression and Morphology Profiles of Cells across 28,000 Genetic and Chemical Perturbations☆51Updated 3 months ago
- ☆19Updated 5 years ago
- Cancer Drug Response prediction using a Recommender System☆42Updated 2 years ago
- Tutorials for multimodal omics data analysis☆17Updated 8 months ago
- Tools related to the Genomics of Drug Sensitivity in Cancer (GDSC) projects (http://www.cancerrxgene.org/ )☆36Updated 3 years ago
- repository containing analysis scripts and auxiliary files☆36Updated 5 years ago
- A Deep Learning based Efficacy Prediction System for drug discovery☆73Updated 2 years ago
- Code accompanying Precision oncology for acute myeloid leukemia using a knowledge bank approach☆29Updated 6 years ago
- MOLI: Multi-Omics Late Integration with deep neural networks for drug response prediction☆55Updated 5 years ago
- Utilizing single-cell omics from patients tumor to predict response and resistance.☆71Updated 2 years ago
- Python 2.7 implementation of network-based stratification (NBS) algorithm from Hofree et al (Nature Methods 2013)☆37Updated last year
- ☆17Updated 4 years ago
- ☆27Updated 7 months ago
- ☆11Updated 5 years ago
- KGWAS: novel genetics discovery enabled by massive functional genomics knowledge graph☆74Updated 8 months ago
- Prize-Collecting Steiner Forests for Interactomes☆62Updated last year
- Evaluating batch correction methods for image-based cell profiling☆14Updated 3 months ago
- jupyter notebook; perform differential gene expression analysis using DESeq2 on TCGA RNAseq data☆33Updated 6 years ago
- A visible neural network model for drug response prediction☆148Updated 2 years ago
- ☆14Updated 5 months ago
- Companion to "A genome-wide almanac of co-essential modules assigns function to uncharacterized genes" (https://doi.org/10.1101/827071)☆27Updated 3 years ago
- Deep Learning the T Cell Receptor Binding Specificity of Neoantigen☆87Updated 3 years ago
- Processed Cell Painting Data for the LINCS Drug Repurposing Project☆30Updated 3 years ago