allielarocco / Microarray-Analysis

Related projects ⓘ

Alternatives and complementary repositories for Microarray-Analysis

• dlaperriere / GEO_microarrays
  analyze_geo_microarrays.py : Differential expression analysis of published microarrays datasets from the NCBI Gene Expression Omnibus (GE…
  ☆10Updated 3 years ago
• ToolsVanBox / PTATO
  PTa Analysis TOolkit
  ☆11Updated 6 months ago
• MaayanLab / maayanlab-bioinformatics
  A collection of useful functions for bioinformatics data analysis
  ☆18Updated 4 months ago
• ConesaLab / TCR_nextflow
  ☆12Updated 2 years ago
• saezlab / ShinyFUNKI
  FUNctional toolKIt platform for multi-omic functional analysis. An standardised pipeline to analysis transcriptomic, proteomic, phospho…
  ☆13Updated 2 years ago
• epigen / open_pipelines
  Pipelines for NGS data preprocessing by the Bock lab and friends
  ☆20Updated 2 years ago
• glasgowcompbio / pyMultiOmics
  Python toolbox for multi-omics data mapping and analysis
  ☆19Updated last year
• kundajelab / coessentiality
  Companion to "A genome-wide almanac of co-essential modules assigns function to uncharacterized genes" (https://doi.org/10.1101/827071)
  ☆27Updated 2 years ago
• haniffalab / Single-cell-RNAseq-data-analysis-bundle
  ☆12Updated 2 years ago
• oscar-franzen / adobo
  functions and algorithms for single cell RNA-seq analyses
  ☆12Updated 3 years ago
• schillerlab / sc-toolbox
  A collection of project templates and useful functions for single-cell data analysis with Scanpy.
  ☆20Updated last year
• epaull / TieDIE
  Tied Diffusion for Subnetwork Discovery (TieDIE)
  ☆36Updated 2 years ago
• broadinstitute / mix_seq_ms
  Code associated with MIX-seq manuscript
  ☆14Updated 4 years ago
• BaderLab / AgingMouseBrainCCInx
  Predicted cell-cell interactions of the aging mouse brain
  ☆19Updated 5 years ago
• crazyhottommy / biotech_resource
  some resources for startup companies
  ☆40Updated last year
• friedue / course_RNA-seq2019
  ☆35Updated 2 years ago
• bigbioinformatics / single_cell_rna_seq_workshop
  repository for the single cell RNA-Seq workshop
  ☆25Updated 3 years ago
• Sun-lab / ideas
  Individual level Differential Expression Analysis for Single cells
  ☆22Updated last year
• ashleymaeconard / TIMEOR
  TIMEOR: Trajectory Inference and Mechanism Exploration with Omics Data in R
  ☆17Updated 2 years ago
• schultzelab / Shiny-Seq
  Shiny-Seq: A web based interactive pipeline to analyze RNA-Seq data
  ☆19Updated 5 years ago
• vanallenlab / retained-intron-neoantigen-pipeline
  Pipeline to call neoantigens from intron retention events derived from RNA-Seq data.
  ☆28Updated 3 years ago
• broadinstitute / single_cell_classification
  Methods to use SNPs or gene expression to classify single cell RNAseq to reference profiles
  ☆27Updated 4 years ago
• AstraZeneca / Omicsfold
  Multi-omics data normalisation, model fitting and visualisation.
  ☆24Updated last year
• TheJacksonLaboratory / PDX-Analysis-Workflows
  ☆11Updated 6 years ago
• kircherlab / cfDNA
  cfDNA analysis workflow
  ☆20Updated last year
• TheJacksonLaboratory / JAXBD2K-ShortCourse
  This repository contains course materials from JAX-BD2K workshop.
  ☆31Updated 5 years ago
• gxiaolab / mountainClimber
  ☆16Updated 5 years ago
• OSU-BMBL / ssread
  A single-cell and spatial RNA-seq database for Alzheimer’s Disease
  ☆19Updated 4 months ago
• davidnboone / tcga_brca_rnaseq
  jupyter notebook; perform differential gene expression analysis using DESeq2 on TCGA RNAseq data
  ☆29Updated 5 years ago
• NBISweden / workshop-mlbiostatistics
  ☆15Updated last month