Alternatives and similar repositories for Microarray-Analysis:

Users that are interested in Microarray-Analysis are comparing it to the libraries listed below

• dlaperriere / GEO_microarrays
  analyze_geo_microarrays.py : Differential expression analysis of published microarrays datasets from the NCBI Gene Expression Omnibus (GE…
  ☆10Updated 3 years ago
• aertslab / GENIE3
  GENIE3 (GEne Network Inference with Ensemble of trees) R-package
  ☆30Updated 2 years ago
• greenelab / RNAseq_titration_results
  Cross-platform normalization enables machine learning model training on microarray and RNA-seq data simultaneously
  ☆35Updated last year
• MaayanLab / maayanlab-bioinformatics
  A collection of useful functions for bioinformatics data analysis
  ☆19Updated 7 months ago
• ConesaLab / TCR_nextflow
  ☆12Updated 2 years ago
• astrazeneca-cgr-publications / JARVIS
  JARVIS: a comprehensive deep learning framework to prioritise non-coding variants in whole genomes
  ☆22Updated 3 weeks ago
• saezlab / ShinyFUNKI
  FUNctional toolKIt platform for multi-omic functional analysis. An standardised pipeline to analysis transcriptomic, proteomic, phospho…
  ☆13Updated 3 years ago
• friedue / course_RNA-seq2019
  ☆35Updated 2 years ago
• getzlab / CPTAC_PanCan_PTM_2023
  ☆14Updated last year
• dzhakparov / GeneSelectR
  ☆19Updated 8 months ago
• crazyhottommy / scCustomize
  Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.
  ☆16Updated 3 years ago
• vanallenlab / retained-intron-neoantigen-pipeline
  Pipeline to call neoantigens from intron retention events derived from RNA-Seq data.
  ☆28Updated 3 years ago
• BaderLab / AgingMouseBrainCCInx
  Predicted cell-cell interactions of the aging mouse brain
  ☆20Updated 5 years ago
• crazyhottommy / biotech_resource
  some resources for startup companies
  ☆42Updated last year
• ManchesterBioinference / IntegratingATAC-RNA-HiC
  scripts for the integrating ATAC-seq, RNA-seq and CHi-C paper
  ☆23Updated 2 years ago
• crazyhottommy / compbio_resources_chatomics
  ☆26Updated last year
• bigbioinformatics / single_cell_rna_seq_workshop
  repository for the single cell RNA-Seq workshop
  ☆27Updated 3 years ago
• ToolsVanBox / PTATO
  PTa Analysis TOolkit
  ☆12Updated 9 months ago
• GregorySchwartz / tooManyCellsR
  An R wrapper for too-many-cells, for clustering single cells and analyzing cell clade relationships with colorful visualizations.
  ☆25Updated 4 years ago
• hemberg-lab / VASAseq_2022
  This repository aims to serve as an index of the work described at Salmen & De Jonghe et. al 2022
  ☆20Updated 2 years ago
• schillerlab / sc-toolbox
  A collection of project templates and useful functions for single-cell data analysis with Scanpy.
  ☆20Updated last year
• pachterlab / RMEJLBASBMP_2024
  Repository for the paper "The impact of package selection and versioning on single-cell RNA-seq analysis"
  ☆18Updated this week
• oscar-franzen / adobo
  functions and algorithms for single cell RNA-seq analyses
  ☆12Updated 4 years ago
• matsengrp / sumrep
  Summary statistics for repertoires
  ☆16Updated last year
• sigven / oncoEnrichR
  Explore the cancer relevance of your gene list
  ☆49Updated 4 months ago
• DavisLaboratory / vissE
  An R/Bioconductor package to identify higher-order molecular phenotypes
  ☆14Updated last year
• shenorrLabTRDF / bseqsc
  Bulk-Sequence Single-Cell Gene Expression Deconvolution Pipeline
  ☆43Updated last year
• rargelaguet / thesis
  University of Cambridge PhD thesis
  ☆15Updated 4 years ago
• epigen / open_pipelines
  Pipelines for NGS data preprocessing by the Bock lab and friends
  ☆20Updated 2 years ago
• haniffalab / Single-cell-RNAseq-data-analysis-bundle
  ☆12Updated 2 years ago