sfu-compbio / colormap
☆16Updated 6 years ago
Related projects ⓘ
Alternatives and complementary repositories for colormap
- Lift-over alignments from variant-aware references☆34Updated last year
- A streaming method for mapping nanopore raw signals☆31Updated 3 years ago
- URMAP ultra-fast read mapper☆39Updated 4 years ago
- This is the Haplotypo repository☆20Updated 6 months ago
- ☆39Updated this week
- An algorithm for centromere assembly using long error-prone reads☆26Updated 3 years ago
- CAMSA: a tool for Comparative Analysis and Merging of Scaffold Assemblies☆24Updated 4 years ago
- Assembler for raw de novo genome assembly of long uncorrected reads.☆37Updated 4 years ago
- Hitting associations with k-mers☆46Updated 2 years ago
- Find Unique genomic Regions☆29Updated this week
- Reference-free Binning of Metagenomics Long Reads using Coverage and Composition☆19Updated 2 months ago
- Pipeline for scaffolding and breaking a genome assembly using 10x genomics linked-reads☆22Updated 2 years ago
- MegaPath-Nano: Accurate Compositional Analysis and Drug-level Antimicrobial Resistance Detection Software for Oxford Nanopore Long-read M…☆14Updated 2 years ago
- run-length BWT tools for genomic sequences☆18Updated 2 years ago
- ☆28Updated last year
- Scaffolding genomes using synthetic long read clouds☆20Updated 8 years ago
- Alignment-based Scrubbing pipeline☆20Updated 8 months ago
- In-depth characterization and annotation of differences between two sets of DNA sequences☆59Updated 4 years ago
- Correcting errors in noisy long reads using variation graphs☆51Updated 2 years ago
- Haplotype-aware genome assembly toolkit☆29Updated 4 years ago
- MIRA sequence assembler☆27Updated 5 years ago
- Fast in-silico normalization algorithm for NGS data☆22Updated 3 years ago
- A comparative genome scaffolding tool☆17Updated 6 years ago
- A C++ library and utilities for manipulating the Graphical Fragment Assembly format.☆51Updated 2 years ago
- Metalign: efficient alignment-based metagenomic profiling via containment min hash☆32Updated last year
- A tool for the recovery of unassembled telomeres from soft-clipped read alignments.☆35Updated last week
- ☆26Updated 5 years ago
- a Contig Alignment Tool for Pairwise Assembly Comparison☆12Updated 4 years ago
- Detect and phase minor SNVs from long-read sequencing data☆15Updated 2 years ago