semiller10 / postnovoLinks
Post-processing peptide de novo sequences to improve their accuracy
☆10Updated 2 years ago
Alternatives and similar repositories for postnovo
Users that are interested in postnovo are comparing it to the libraries listed below
Sorting:
- ☆15Updated last year
- ☆15Updated 3 weeks ago
- Collisional cross-section prediction for modified and multiconformational peptides☆12Updated last month
- ☆14Updated 11 months ago
- This work was published on Analytical Chemistry: Full-Spectrum Prediction of Peptides Tandem Mass Spectra using Deep Neural Network☆31Updated 2 years ago
- ☆20Updated 7 months ago
- Paper collection about de novo peptide Sequening☆19Updated 7 months ago
- Proteomics Mass Spectrometry Datasets for Machine Learning☆19Updated last year
- Predict the structure of immune receptor proteins☆54Updated 10 months ago
- ☆14Updated 3 years ago
- Common utilities for parsing and handling peptide-spectrum matches and search engine results in Python☆29Updated last month
- DeepLC: Retention time prediction for (modified) peptides using Deep Learning.☆70Updated this week
- An open-source prediction framework for peptide ion collision cross section (CCS) values with python.☆15Updated last year
- pyQms, generalized, fast and accurate mass spectrometry data quantification☆28Updated 3 weeks ago
- Pipeline for de novo peptide sequencing (Novor, DeepNovo, SMSNet, PointNovo, Casanovo) and assembly with ALPS.☆41Updated last year
- De novo peptide sequencing with InstaNovo: Accurate, database-free peptide identification for large scale proteomics experiments☆98Updated 2 weeks ago
- MS²PIP: Fast and accurate peptide spectrum prediction for multiple fragmentation methods, instruments, and labeling techniques.☆45Updated 6 months ago
- Interactive Python notebooks for PDBe API training☆56Updated last week
- Peptide Correlation analysis☆10Updated 11 months ago
- Rescoring and spectral library generation pipeline for proteomics.☆49Updated this week
- ☆19Updated 6 months ago
- Synthetic mzML writer☆13Updated 6 months ago
- An LC-MS/MS glycan and glycopeptide search engine☆13Updated last week
- MassDash: A web-based dashboard for streamlined DIA-MS visualization, analysis, prototyping, and optimization☆21Updated last month
- Fast and flexible semi-supervised learning for peptide detection in Python☆48Updated 6 months ago
- Deep learning framework for proteomics☆132Updated 3 weeks ago
- pDeepXL: MS/MS spectrum prediction for cross-linked peptide pairs by deep learning☆12Updated 4 years ago
- Package for processing and analyzing glycans and their role in biology.☆77Updated this week
- Python package for protein sequence-based bidirectional recurrent neural network. Generalizable to a variety of protein bioinformatic app…☆20Updated last month
- ☆22Updated 4 years ago