semiller10 / postnovoLinks
Post-processing peptide de novo sequences to improve their accuracy
☆10Updated 3 years ago
Alternatives and similar repositories for postnovo
Users that are interested in postnovo are comparing it to the libraries listed below
Sorting:
- ☆15Updated 2 years ago
- ☆19Updated 2 weeks ago
- This work was published on Analytical Chemistry: Full-Spectrum Prediction of Peptides Tandem Mass Spectra using Deep Neural Network☆34Updated 2 years ago
- Collisional cross-section prediction for modified and multiconformational peptides☆13Updated last week
- ☆15Updated last year
- MS²PIP: Fast and accurate peptide spectrum prediction for multiple fragmentation methods, instruments, and labeling techniques.☆47Updated last week
- Paper collection about de novo peptide Sequening☆20Updated 10 months ago
- ☆15Updated 3 years ago
- Synthetic mzML writer☆13Updated 9 months ago
- Proteomics Mass Spectrometry Datasets for Machine Learning☆21Updated last year
- De novo peptide sequencing with InstaNovo: Accurate, database-free peptide identification for large scale proteomics experiments☆107Updated this week
- Peptide Correlation analysis☆10Updated last year
- mzSpecLib: A standard format to exchange/distribute spectral libraries☆30Updated last month
- Predict the structure of immune receptor proteins☆56Updated last year
- ☆21Updated 10 months ago
- Common utilities for parsing and handling peptide-spectrum matches and search engine results in Python☆29Updated last month
- DeepLC: Retention time prediction for peptides carrying any modification.☆72Updated last week
- pyQms, generalized, fast and accurate mass spectrometry data quantification☆28Updated last month
- An open-source prediction framework for peptide ion collision cross section (CCS) values with python.☆15Updated 2 years ago
- Pipeline for de novo peptide sequencing (Novor, DeepNovo, SMSNet, PointNovo, Casanovo) and assembly with ALPS.☆43Updated last year
- A Python interface to proteomics data repositories☆36Updated 6 months ago
- Interactive Python notebooks for PDBe API training☆57Updated 2 weeks ago
- Template-based assembly of proteomics short reads for de novo antibody sequencing and repertoire profiling☆25Updated last year
- An LC-MS/MS glycan and glycopeptide search engine☆13Updated 3 months ago
- Python package for investigating the structural context of PTMs☆28Updated 11 months ago
- Package for processing and analyzing glycans and their role in biology.☆83Updated this week
- Rescoring and spectral library generation pipeline for proteomics.☆52Updated this week
- A Python implementation of Baffling Recursive Algorithm for Isotopic distributioN calculations☆23Updated 6 months ago
- Community-curated tutorials and datasets for ML in proteomics☆55Updated last month
- Fast and flexible semi-supervised learning for peptide detection in Python☆49Updated 9 months ago