Alternatives and similar repositories for HUMOS

Users that are interested in HUMOS are comparing it to the libraries listed below

• computational-metabolomics / dimspy
  Python package for processing direct-infusion mass spectrometry-based metabolomics and lipidomics data
  ☆20Updated last year
• EMSL-Computing / PeakDecoder
  A workflow for metabolite identification and accurate profiling in multidimensional LC-IM-MS-DIA measurements. DOI: 10.5281/zenodo.
  ☆16Updated 2 years ago
• wfondrie / ppx
  A Python interface to proteomics data repositories
  ☆34Updated last week
• CompOmics / psm_utils
  Common utilities for parsing and handling peptide-spectrum matches and search engine results in Python
  ☆27Updated 2 weeks ago
• computational-metabolomics / msPurity
  R-package - Automated Evaluation of Precursor Ion Purity for Mass Spectrometry Based Fragmentation in Metabolomics
  ☆16Updated last year
• stanstrup / commonMZ
  A collection of common mz values found in mass spectrometry.
  ☆20Updated last year
• zamboni-lab / SLAW
  Scalable and self-optimizing processing workflow for untargeted LC-MS
  ☆28Updated 10 months ago
• statisticalbiotechnology / triqler
  The triqler (TRansparent Identification-Quantification-linked Error Rates)'s source and example code
  ☆24Updated last month
• MannLabs / structuremap
  Python package for investigating the structural context of PTMs
  ☆28Updated 5 months ago
• pFindStudio / pGlyco3
  ☆20Updated 4 months ago
• kusterlab / universal_spectrum_explorer
  ☆15Updated 3 years ago
• wfondrie / mokapot
  Fast and flexible semi-supervised learning for peptide detection in Python
  ☆44Updated 3 months ago
• WMBEdmands / compMS2Miner
  metabolite identification R-package for metabolomic high-resolution LC-MS datasets.
  ☆15Updated 8 years ago
• ccdmb / BioDendro
  A package to cluster and visualise MS/MS spectral data
  ☆11Updated 4 years ago
• zmahnoor14 / MAW
  Metabolome Annotation Workflow
  ☆25Updated last year
• MarcIsak / MSLibrarian
  MSLibrarian is an R-package to optimize predicted spectral libraries for DIA proteomics
  ☆14Updated 2 years ago
• wilhelm-lab / koina
  Democratizing ML in proteomics
  ☆37Updated last week
• RogerGinBer / RHermes
  RHermes is a semi-targeted metabolomics package to deeply characterize biological and environmental samples.
  ☆27Updated 3 weeks ago
• kusterlab / curve_curator
  Analysis platform for large-scale dose-dependent data
  ☆25Updated last month
• eMetaboHUB / MS-CleanR
  ☆25Updated last year
• MetaSys-LISBP / IsoCor
  IsoCor: Isotope Correction for mass spectrometry labeling experiments
  ☆24Updated 2 months ago
• Proteobench / ProteoBench
  ProteoBench is an open and collaborative platform for community-curated benchmarks for proteomics data analysis pipelines. Our goal is to…
  ☆46Updated this week
• shuzhao-li-lab / PythonCentricPipelineForMetabolomics
  Python pipeline for metabolomics data preprocessing, QC, standardization and annotation
  ☆15Updated 6 months ago
• MatteoLacki / timsr
  TimsR: Easy access to timsTOF Pro data from R.
  ☆10Updated 4 years ago
• Philipbear / BUDDY_Metabolomics
  Molecular formula discovery via bottom-up MS/MS interrogation
  ☆13Updated 9 months ago
• madeleineernst / pyMolNetEnhancer
  ☆20Updated last year
• bittremieux-lab / GLEAMS
  GLEAMS is a Learned Embedding for Annotating Mass Spectra.
  ☆25Updated last year
• biosustain / pyOpenMS_UmetaFlow
  Untargeted metabolomics workflow for data processing and analysis written in Jupyter notebooks (Python)
  ☆21Updated 7 months ago
• Villen-Lab / pyAscore
  A python package for fast post translational modification localization, powered by Cython.
  ☆19Updated last year
• biocore / q2-qemistree
  Hierarchical orderings for mass spectrometry data. Canonically pronounced "chemis-tree".
  ☆31Updated 2 years ago