Alternatives and similar repositories for denovo_benchmarks

Users that are interested in denovo_benchmarks are comparing it to the libraries listed below

• jingbo02 / Awesome-Denovo-Peptide-Sequencing
  Paper collection about de novo peptide Sequening
  ☆19Updated 9 months ago
• brennanaba / ImmuneBuilder
  Predict the structure of immune receptor proteins
  ☆57Updated last year
• semiller10 / postnovo
  Post-processing peptide de novo sequences to improve their accuracy
  ☆10Updated 2 years ago
• AmadeusloveIris / GraphNovo
  ☆15Updated 2 years ago
• flyark / AFM-LIS
  Local Interaction Score (LIS) Calculation from AlphaFold-Multimer (Enhanced Protein-Protein Interaction Discovery via AlphaFold-Multimer)…
  ☆59Updated last week
• wilhelm-lab / PROSPECT
  Proteomics Mass Spectrometry Datasets for Machine Learning
  ☆19Updated last year
• the-protein-engineering-tournament / pet-pilot-2023
  Results and data from the pilot round of the Protein Engineering Tournament
  ☆30Updated 7 months ago
• seanrjohnson / protein_scoring
  Generating and scoring novel enzyme sequences with a variety of models and metrics
  ☆71Updated 4 months ago
• zongmingchua / cafa5
  Code for generating model and predictions for CAFA5 competition 2023 (4th place solution)
  ☆15Updated last year
• wukevin / proteinclip
  Contrastive learning harmonizing protein language models and natural language models
  ☆38Updated last year
• Profluent-AI / proseLM-public
  Adapting protein language models for structure-conditioned design
  ☆41Updated last year
• PDB-REDO / AlphaBridge
  ☆45Updated last month
• CongLabCode / RoseTTAFold2-PPI
  Fast deep learning methods for large-scale protein-protein interaction screening
  ☆93Updated 3 months ago
• Doudna-lab / GARNET_DL
  ☆36Updated 9 months ago
• mnielLab / AbEpiTope-1.0
  AbEpiTope-1.0 is a computational tool that features two scores: AbEpiScore-1.0, designed for assessing the accuracy of modelled AbAg inte…
  ☆24Updated last month
• HySonLab / Directed_Evolution
  Protein Design by Machine Learning guided Directed Evolution
  ☆46Updated 7 months ago
• agitter / adaptyvbio-egfr
  Sequences from Adaptyv Bio’s EGFR Protein Design Competition
  ☆15Updated 2 months ago
• adaptyvbio / egfr_competition_1
  This repo contains the results data for Round 1 of Adaptyv Bio’s EGFR Protein Design Competition.
  ☆34Updated 10 months ago
• Exscientia / abodybuilder3
  ☆69Updated last year
• gagneurlab / spectralis
  ☆14Updated last year
• moritzgls / ESM-Effect
  ☆15Updated 8 months ago
• BEAM-Labs / BALM
  Inference code for Bio-Inspired Antibody Language Model
  ☆25Updated last year
• sacdallago / biotrainer
  Biological prediction models made simple.
  ☆45Updated last week
• ml4bio / USPNet
  Nature Computational Science: Unbiased organism-agnostic and highly sensitive signal peptide predictor with deep protein language model
  ☆35Updated 5 months ago
• rohitsinghlab / raygun
  Template-based protein design with Raygun
  ☆76Updated last week
• ronboger / conformal-protein-retrieval
  ☆16Updated 2 months ago
• oxpig / CaLM
  Protein language model trained on coding DNA
  ☆51Updated last year
• MarkusWenzel / xai-proteins
  Insights into the inner workings of transformer models for protein function prediction
  ☆14Updated last year
• PHOENIXcenter / pi-PrimeNovo
  ☆41Updated last week
• microsoft / protein-transfer
  ☆26Updated last year