CompOmics / denovoguiLinks
Graphical user interface for de novo sequencing of tandem mass spectra
☆15Updated last year
Alternatives and similar repositories for denovogui
Users that are interested in denovogui are comparing it to the libraries listed below
Sorting:
- Using MASST or fastMASST, adding metadata onto a tree ontology for microbes☆22Updated last month
- Pre-processing of mass spectrometry-based metabolomics data with quantification and identification based on MS1 and MS2 data.☆23Updated 5 months ago
- Untargeted metabolomics workflow for large-scale data processing and analysis implemented in Snakemake☆29Updated 10 months ago
- ☆14Updated this week
- a metabologenomic pipeline integrating metabolomic and genomic data to identify novel RiPPs and their BGCs☆12Updated 4 years ago
- HLA-I ligand predictor☆43Updated last month
- Python package for processing direct-infusion mass spectrometry-based metabolomics and lipidomics data☆21Updated 2 years ago
- Ursgal - universal Python module combining common bottom-up proteomics tools for large-scale analysis☆42Updated 2 weeks ago
- MaxQuant with snakemake and singularity workflow for open and scalable mass spectrometry data analysis on Linux computing clusters☆27Updated 7 years ago
- A global network optimization approach for untargeted LC-MS metabolomics data annotation and metabolite discovery☆48Updated 2 years ago
- Natural Product Discovery tools -- a toolkit containing various pipelines for in silico analysis of natural product mass spectrometry da…☆28Updated 3 years ago
- Confidence Estimation for Mass Spectrometry Proteomics☆13Updated 5 months ago
- ☆28Updated 9 months ago
- ☆66Updated last year
- Identify and quantify MHC eluted peptides from mass spectrometry raw data☆39Updated last week
- Group-DIA, a software for analyzing multiple DIA data files☆13Updated 8 years ago
- MS-GF+ (aka MSGF+ or MSGFPlus) performs peptide identification by scoring MS/MS spectra against peptides derived from a protein sequence …☆81Updated 3 weeks ago
- Pipeline for de novo peptide sequencing (Novor, DeepNovo, SMSNet, PointNovo, Casanovo) and assembly with ALPS.☆42Updated last year
- An tandem mass spectrometry (MS/MS) sequence database search tool.☆53Updated this week
- De novo peptide sequencing for DDA and DIA by deep learning☆39Updated 4 years ago
- MaxQuant Automated Pipeline☆23Updated 5 years ago
- A BioJS viewer for protein sequence features☆51Updated 2 years ago
- Workshop illustrating mass spectrometry data analysis in R and use of the updated xcms functionality for the preprocessing of LC-MS data.☆27Updated 2 years ago
- Multi-Omics Peptide Generator☆29Updated 2 weeks ago
- Interpretation of proteomics identification results☆52Updated 3 months ago
- pathway and network analysis for metabolomics☆43Updated last year
- Absolute quantification package based on quantms.io☆16Updated last month
- Computational analysis for mass spectrometry-based proteomics data☆20Updated 5 months ago
- A Python interface to proteomics data repositories☆35Updated 5 months ago
- Quickly find and score consensus between metabolite identifications and gene annotations☆18Updated last week