This work was published on Analytical Chemistry: Full-Spectrum Prediction of Peptides Tandem Mass Spectra using Deep Neural Network
☆34Aug 4, 2023Updated 2 years ago
Alternatives and similar repositories for PredFull
Users that are interested in PredFull are comparing it to the libraries listed below
Sorting:
- DeepLC: Retention time prediction for peptides carrying any modification.☆73Jan 13, 2026Updated last month
- De novo peptide sequencing for DDA and DIA by deep learning☆40Nov 26, 2020Updated 5 years ago
- A Python package for amino acid sequence analysis. Proforma 2.1 complicant.☆14Feb 6, 2026Updated 3 weeks ago
- Post-processing peptide de novo sequences to improve their accuracy☆10Nov 29, 2022Updated 3 years ago
- MS²PIP: Fast and accurate peptide spectrum prediction for multiple fragmentation methods, instruments, and labeling techniques.☆49Feb 10, 2026Updated 2 weeks ago
- Processing and analysis of proteomics data☆17Feb 19, 2026Updated last week
- ☆12Jun 13, 2024Updated last year
- The state of the art Deep CNN neural network for de novo sequencing of tandem mass spectra☆39Oct 30, 2024Updated last year
- De Novo Mass Spectrometry Peptide Sequencing with a Transformer Model☆177Updated this week
- ☆15May 30, 2025Updated 9 months ago
- A deep learning toolkit for mass spectrometry☆87Jan 7, 2026Updated last month
- Automatically exported from code.google.com/p/mstoolkit☆30Dec 1, 2025Updated 2 months ago
- DeepMass is a suite of tools to enable mass spectrometry data analysis using modern machine learning techniques.☆53Nov 18, 2021Updated 4 years ago
- Spectral library searching using approximate nearest neighbor techniques.☆48Feb 11, 2026Updated 2 weeks ago
- A list of tools on proteomics using deep learning☆106May 5, 2024Updated last year
- Modular and user-friendly platform for AI-assisted rescoring of peptide identifications☆62Feb 11, 2026Updated 2 weeks ago
- Protein Identification with Deep Learning☆102Nov 27, 2020Updated 5 years ago
- A library for deisotoping and charge state deconvolution of complex mass spectra☆41Jul 30, 2025Updated 7 months ago
- pDeep: Predicting MS/MS Spectra of Peptides with Deep Learning☆42Aug 22, 2019Updated 6 years ago
- Pipeline for de novo peptide sequencing (Novor, DeepNovo, SMSNet, PointNovo, Casanovo) and assembly with ALPS.☆44Feb 23, 2024Updated 2 years ago
- Proteomics Mass Spectrometry Datasets for Machine Learning☆21Aug 16, 2024Updated last year
- Computational analysis for mass spectrometry-based proteomics data☆20Updated this week
- Fragment Graphical Variational AutoEncoding for Screening and Generating Molecules☆14Nov 21, 2022Updated 3 years ago
- geoRge: a computational tool for stable isotope labelling detection in LC/MS-based untargeted metabolomics☆11Sep 17, 2021Updated 4 years ago
- Python package for efficient mass spectrometry data processing and visualization☆164Dec 18, 2025Updated 2 months ago
- [Bioinformatics] 3DMolMS: prediction of tandem mass spectra from 3D molecular conformations☆23Oct 13, 2025Updated 4 months ago
- Prosit offers high quality MS2 predicted spectra for any organism and protease as well as iRT prediction. When using Prosit is helpful fo…☆92Aug 17, 2023Updated 2 years ago
- A Deep Learning Framework to Interpret Raw Mass Spectrometry (m/z) Data☆26Jan 21, 2024Updated 2 years ago
- Tandem Mass Spectrum Prediction with Graph Transformers☆99Aug 26, 2024Updated last year
- Paired Mass Distance(PMD) analysis for GC/LC-MS based nontarget analysis☆11May 6, 2025Updated 9 months ago
- PGx supports proteogenomic intregration of mass spectrometry (MS) proteomics data with next generation sequencing (NGS) by mapping identi…☆10Jul 9, 2024Updated last year
- HUMOS is a web application aimed to help teaching Orbitrap mass spectrometry. HUMOS models a mass spectrum of a peptide mixture allowing …☆11Mar 10, 2025Updated 11 months ago
- R Interface to the Metabolights REST API☆11Aug 19, 2025Updated 6 months ago
- metabolomics/lipidomics data processing☆10Feb 17, 2021Updated 5 years ago
- ☆11Nov 11, 2023Updated 2 years ago
- ☆10Feb 3, 2026Updated 3 weeks ago
- pDeepXL: MS/MS spectrum prediction for cross-linked peptide pairs by deep learning☆12Feb 8, 2021Updated 5 years ago
- A Deep LEArning-based Mass Spectra Embedder for spectral similarity scoring☆11Jun 18, 2025Updated 8 months ago
- Collisional cross-section prediction for modified and multiconformational peptides☆13Feb 18, 2026Updated last week