lkytal / PredFull
This work was published on Analytical Chemistry: Full-Spectrum Prediction of Peptides Tandem Mass Spectra using Deep Neural Network
☆29Updated last year
Alternatives and similar repositories for PredFull:
Users that are interested in PredFull are comparing it to the libraries listed below
- Bottom-up MS/MS interrogation & Experiment-specific global annotation☆28Updated 3 months ago
- ☆17Updated last month
- A small library to provide peak picking for software processing mass spectrometry data☆21Updated 3 months ago
- A known-to-unknown metabolite identification workflow☆20Updated 4 years ago
- Common utilities for parsing and handling peptide-spectrum matches and search engine results in Python☆27Updated 3 weeks ago
- A Python implementation of Baffling Recursive Algorithm for Isotopic distributioN calculations☆20Updated 2 months ago
- DeepLC: Retention time prediction for (modified) peptides using Deep Learning.☆61Updated last month
- MS2Query - machine learning assisted library querying of MS/MS spectra☆44Updated 6 months ago
- ☆13Updated 5 months ago
- The Multiplierz Proteomics Library☆24Updated 11 months ago
- ☆62Updated 7 months ago
- TidyMS: Tools for working with MS data in untargeted metabolomics☆55Updated 8 months ago
- Democratizing ML in proteomics☆34Updated last week
- ☆32Updated 3 weeks ago
- Proteomics Mass Spectrometry Datasets for Machine Learning☆13Updated 7 months ago
- MS²PIP: Fast and accurate peptide spectrum prediction for multiple fragmentation methods, instruments, and labeling techniques.☆42Updated 2 weeks ago
- Metabolome Annotation Workflow☆25Updated last year
- Using deep learning to generate in silico spectral libraries for data-independent acquisition analysis.☆41Updated 2 years ago
- Deep learning similarity measure for comparing MS/MS spectra with respect to their chemical similarity☆60Updated 3 weeks ago
- GLEAMS is a Learned Embedding for Annotating Mass Spectra.☆24Updated last year
- Pipeline for de novo peptide sequencing (Novor, DeepNovo, SMSNet, PointNovo, Casanovo) and assembly with ALPS.☆39Updated last year
- pyQms, generalized, fast and accurate mass spectrometry data quantification☆28Updated 8 months ago
- NeatMS is an open source python package for untargeted LCMS signal labelling and filtering.☆32Updated 3 years ago
- pDeep: Predicting MS/MS Spectra of Peptides with Deep Learning☆35Updated 5 years ago
- ☆10Updated 5 months ago
- Public Workflows at GNPS☆60Updated last year
- Streamlining Mass Spectrometry Data Visualization with Pandas☆13Updated this week
- ☆11Updated 3 weeks ago
- Instrument Application Programming Interface☆45Updated last month
- MetEx is a tool to extract and annotate metabolites from liquid chromatography–mass spectrometry data.☆16Updated last year