5-day workshop on Metabolomics and Data Analysis
☆19Sep 1, 2019Updated 6 years ago
Alternatives and similar repositories for espol-workshop
Users that are interested in espol-workshop are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Workshop illustrating mass spectrometry data analysis in R and use of the updated xcms functionality for the preprocessing of LC-MS data.☆28May 25, 2023Updated 3 years ago
- pathway and network analysis for metabolomics☆44Dec 8, 2025Updated 7 months ago
- MetEx is a tool to extract and annotate metabolites from liquid chromatography–mass spectrometry data.☆18Nov 14, 2023Updated 2 years ago
- Notebooks in computational metabolomics☆15Feb 3, 2025Updated last year
- geoRge: a computational tool for stable isotope labelling detection in LC/MS-based untargeted metabolomics☆11Sep 17, 2021Updated 4 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- ☆24May 6, 2020Updated 6 years ago
- Compile Mass Spectral Libraries from Various Sources☆20May 3, 2024Updated 2 years ago
- Toolkit for untargeted metabolomics profiling☆13Aug 25, 2025Updated 11 months ago
- Defined MRM transitions from untargeted metabolomics data☆11Nov 13, 2023Updated 2 years ago
- A Reproducible Untargeted Metabolomics Data Processing Pipeline☆11Mar 18, 2021Updated 5 years ago
- Lithops-based Serverless implementation of the METASPACE spatial metabolomics annotation pipeline☆12Jul 6, 2023Updated 3 years ago
- On-instrument and post-acquisition targeted feature extraction☆13Apr 24, 2026Updated 3 months ago
- These workshops and tutorials provide use cases and examples for mass spectrometry data handling and analysis using the Spectra Bioconduc…☆22Aug 7, 2024Updated last year
- Shiny app for retention time prediction☆11Dec 1, 2025Updated 7 months ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Python library for large-scale targeted metabolomics.☆23Updated this week
- Rocker image for metabolomics data analysis☆14Oct 25, 2025Updated 9 months ago
- Missing value imputation and evaluation, especially for metabolomics data sets☆20Jun 27, 2018Updated 8 years ago
- asari, metabolomics data preprocessing☆68Updated this week
- This repository holds course materials for the fall 2021 offering of Statistics 243 at UC Berkeley.☆16Sep 28, 2022Updated 3 years ago
- Tutorials for multimodal omics data analysis☆20Feb 28, 2025Updated last year
- A curated biochemical database that integrates and refines data from KEGG and ATLAS databases to support precise analyses of biochemical …☆16May 13, 2026Updated 2 months ago
- SciLifeLab SIB Summer School for Advanced topics in Single Cell Omics. Site: https://nbisweden.github.io/single-cell_sib_scilifelab_2021/☆23Sep 19, 2021Updated 4 years ago
- This repository contains training data for retention time prediction for the identification of metabolites from non-targeted LC-MS based …☆64Jul 9, 2026Updated 2 weeks ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Online workflow guidelines for metabolomics☆25Updated this week
- ☆16Jun 9, 2025Updated last year
- Multi-omic Integration and Analysis of cBioPortal and TCGA data with MultiAssayExperiment☆25Jul 2, 2025Updated last year
- Using genome-wide markers for polyploid breeding☆13May 2, 2026Updated 2 months ago
- Used to deisotope mass spectra and to detect features from mass spectrometry data using observed isotopic signatures.☆20Oct 23, 2025Updated 9 months ago
- Drug Response Prediction and Biomarker Discovery Using Multi-Modal Deep Learning☆14Apr 24, 2024Updated 2 years ago
- Spectral entropy for mass spectrometry data.☆38Jul 7, 2026Updated 3 weeks ago
- A logistic regression model for testing differential abundance in compositional microbiome data☆13Jul 25, 2023Updated 3 years ago
- Various Classification models used are Logistic regression, K-NN, Support Vector Machine, Kernel SVM, Naive Bayes, Decision Tree Classifi…☆10Jan 18, 2018Updated 8 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Tool for reliability assessment of omics peprocessing☆12Jan 13, 2026Updated 6 months ago
- mLDM: a new hierarchical Bayesian statistical model for sparse microbial association discovery☆11Oct 18, 2016Updated 9 years ago
- Website for the 2021-2022 Caltech class Bi/BE/CS 183: Introduction to Computational Biology and Bioinformatics☆10Mar 11, 2022Updated 4 years ago
- sirius-libs - Metabolomics mass spectrometry framework for molecular formula identification of small molecules written in Java☆59Aug 1, 2024Updated last year
- Cluster Evaluation R package (ClueR) for detecting key signaling events from time-series phosphoproteomics data☆11Jan 10, 2024Updated 2 years ago
- ☆13Oct 30, 2019Updated 6 years ago
- A collection of common mz values found in mass spectrometry.☆21Jun 13, 2024Updated 2 years ago