5-day workshop on Metabolomics and Data Analysis
☆18Sep 1, 2019Updated 6 years ago
Alternatives and similar repositories for espol-workshop
Users that are interested in espol-workshop are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Notebooks in computational metabolomics☆15Feb 3, 2025Updated last year
- Workshop illustrating mass spectrometry data analysis in R and use of the updated xcms functionality for the preprocessing of LC-MS data.☆28May 25, 2023Updated 2 years ago
- pathway and network analysis for metabolomics☆43Dec 8, 2025Updated 3 months ago
- geoRge: a computational tool for stable isotope labelling detection in LC/MS-based untargeted metabolomics☆11Sep 17, 2021Updated 4 years ago
- MetEx is a tool to extract and annotate metabolites from liquid chromatography–mass spectrometry data.☆18Nov 14, 2023Updated 2 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Compile Mass Spectral Libraries from Various Sources☆17May 3, 2024Updated last year
- ☆24May 6, 2020Updated 5 years ago
- Toolkit for untargeted metabolomics profiling☆13Aug 25, 2025Updated 7 months ago
- Defined MRM transitions from untargeted metabolomics data☆11Nov 13, 2023Updated 2 years ago
- These workshops and tutorials provide use cases and examples for mass spectrometry data handling and analysis using the Spectra Bioconduc…☆22Aug 7, 2024Updated last year
- A Reproducible Untargeted Metabolomics Data Processing Pipeline☆11Mar 18, 2021Updated 5 years ago
- Lithops-based Serverless implementation of the METASPACE spatial metabolomics annotation pipeline☆12Jul 6, 2023Updated 2 years ago
- asari, metabolomics data preprocessing☆60Mar 21, 2026Updated last week
- On-instrument and post-acquisition targeted feature extraction☆13Sep 27, 2025Updated 6 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Shiny app for retention time prediction☆11Dec 1, 2025Updated 3 months ago
- Python library for large-scale targeted metabolomics.☆23Mar 2, 2026Updated 3 weeks ago
- Rocker image for metabolomics data analysis☆13Oct 25, 2025Updated 5 months ago
- Tutorials for multimodal omics data analysis☆19Feb 28, 2025Updated last year
- SciLifeLab SIB Summer School for Advanced topics in Single Cell Omics. Site: https://nbisweden.github.io/single-cell_sib_scilifelab_2021/☆23Sep 19, 2021Updated 4 years ago
- This repository holds course materials for the fall 2021 offering of Statistics 243 at UC Berkeley.☆16Sep 28, 2022Updated 3 years ago
- ☆16Jun 9, 2025Updated 9 months ago
- Missing value imputation and evaluation, especially for metabolomics data sets☆19Jun 27, 2018Updated 7 years ago
- Online workflow guidelines for metabolomics☆24Jan 4, 2026Updated 2 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- This repository contains training data for retention time prediction for the identification of metabolites from non-targeted LC-MS based …☆60Updated this week
- A logistic regression model for testing differential abundance in compositional microbiome data☆13Jul 25, 2023Updated 2 years ago
- Using genome-wide markers for polyploid breeding☆12Updated this week
- Drug Response Prediction and Biomarker Discovery Using Multi-Modal Deep Learning☆14Apr 24, 2024Updated last year
- Used to deisotope mass spectra and to detect features from mass spectrometry data using observed isotopic signatures.☆19Oct 23, 2025Updated 5 months ago
- Tool for reliability assessment of omics peprocessing☆11Jan 13, 2026Updated 2 months ago
- Spectral entropy for mass spectrometry data.☆36Mar 17, 2026Updated last week
- Various Classification models used are Logistic regression, K-NN, Support Vector Machine, Kernel SVM, Naive Bayes, Decision Tree Classifi…☆10Jan 18, 2018Updated 8 years ago
- mLDM: a new hierarchical Bayesian statistical model for sparse microbial association discovery☆11Oct 18, 2016Updated 9 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Website for the 2021-2022 Caltech class Bi/BE/CS 183: Introduction to Computational Biology and Bioinformatics☆10Mar 11, 2022Updated 4 years ago
- sirius-libs - Metabolomics mass spectrometry framework for molecular formula identification of small molecules written in Java☆56Aug 1, 2024Updated last year
- A collection of common mz values found in mass spectrometry.☆20Jun 13, 2024Updated last year
- RHermes is a semi-targeted metabolomics package to deeply characterize biological and environmental samples.☆28Jun 4, 2025Updated 9 months ago
- LaTeX template of graduate Thesis [University of Chinese Academy of Sciences]☆12Nov 7, 2017Updated 8 years ago
- ANnotation-based ANalysis of Specific Interactions☆10Oct 10, 2025Updated 5 months ago
- [Bioinformatics] 3DMolMS: prediction of tandem mass spectra from 3D molecular conformations☆23Oct 13, 2025Updated 5 months ago