Model Context Protocol (MCP) server for mapping clinical terminology to Observational Medical Outcomes Partnership (OMOP) concepts using Large Language Models
☆34Feb 19, 2026Updated last month
Alternatives and similar repositories for omop_mcp
Users that are interested in omop_mcp are comparing it to the libraries listed below
Sorting:
- Natural Language to SQL Queries in the OMOP CDM Datasets☆11Jun 12, 2023Updated 2 years ago
- A software toolkit for the interconversion of standard data models for phenotypic data☆15Mar 13, 2026Updated last week
- Anthropic api wrapper for Go☆12Jun 28, 2024Updated last year
- Workflow Execution Service Backend☆20Updated this week
- ☆10Apr 19, 2014Updated 11 years ago
- Analyzing different ML model comparison metrics☆17Jan 20, 2024Updated 2 years ago
- This is an R package that implements a library of standard queries that run against the OMOP-CDM.☆18Jun 7, 2024Updated last year
- Tool for writing a draft version of a clinical discharge letter using a LLM☆26Jan 13, 2026Updated 2 months ago
- CLUE: A Clinical Language Understanding Evaluation for LLMs☆20Jan 22, 2025Updated last year
- ☆28May 13, 2024Updated last year
- Model Context Protocol Server for the Observational Medical Outcomes Partnership (OMOP) Common Data Model☆24Jan 12, 2026Updated 2 months ago
- An ETL pipeline to transform your EMP data to OMOP.☆16Oct 15, 2025Updated 5 months ago
- Code for Retrieval augmented text-to-SQL generation for epidemiological question answering using electronic health records☆24May 15, 2024Updated last year
- The complete tips and notes from Duolingo Hebrew course in one file☆13Mar 1, 2019Updated 7 years ago
- Tools for the Semi-Automatic Checking of Research Outputs. These are tools for researchers to use as drop-in replacements for common anal…☆22Updated this week
- A fast dictionary-based approach for semantic annotation with approximate string matching algorithms☆15Mar 31, 2023Updated 2 years ago
- A python module for redaction of personally identifiable information (PII) in clinical free-text. It builds on Presidio and is extremely …☆18Nov 13, 2025Updated 4 months ago
- Helm charts for the GOV.UK website and publishing platform (content management system). Cluster turnup automation is in https://github.co…☆22Updated this week
- This is a LaTeX template for JAMIA.☆22May 4, 2024Updated last year
- Adaptation of DQN, DDQN and COMA for multi-agent Gym environments☆11Oct 3, 2023Updated 2 years ago
- A package supporting the conversion from Synthea CSV to OMOP CDM☆121Feb 21, 2025Updated last year
- [under development] Tools for ETL into OMOP CDM and deployment of OHDSI toolstack☆39Nov 10, 2023Updated 2 years ago
- 中国版Supabase☆28Oct 23, 2025Updated 4 months ago
- Standard Architecture for Trusted Research Environments specification☆29Mar 13, 2026Updated last week
- Self-supervised learning course at CS HSE☆12May 24, 2023Updated 2 years ago
- Step-by-step to install LunarVim on Raspberry Pi 4.☆14Jun 20, 2022Updated 3 years ago
- NHITW_cloud_analyzer_react_MUI☆13Jan 21, 2026Updated last month
- AI4Green is an Electronic Laboratory Notebook which combines data storage and sharing while promoting green and sustainable chemistry.☆27Mar 12, 2026Updated last week
- Streamlined Data Mapping to OMOP☆21Mar 10, 2026Updated last week
- Репозиторий курса "Практические аспекты обучения больших языковых моделей", ВМК МГУ, осень, 2024☆18Dec 24, 2024Updated last year
- LongHealth: A Question Answering Benchmark with Long Clinical Documents☆28Nov 24, 2024Updated last year
- Librairie python qui simplifie l'interrogation des contenus de legifrance☆52Feb 15, 2026Updated last month
- An ultimate list of medical abbrevations with meaning, Chinese translation and Wikipedia link.☆10Nov 16, 2020Updated 5 years ago
- Official code for ACL 2023 (short, findings) paper "Recursion of Thought: A Divide and Conquer Approach to Multi-Context Reasoning with L…☆45Jun 13, 2023Updated 2 years ago
- Data2Evidence is an end-to-end solution for management and analysis of OMOP data - https://data2evidence.org☆33Updated this week
- Docker with Airflow + Postgres + Spark cluster + JDK (spark-submit support) + Jupyter Notebooks☆24Apr 2, 2022Updated 3 years ago
- Collection of tools and resources for managing the statistical disclosure control of trained machine learning models☆34Updated this week
- Repository for participants of the "Python for HPC" training☆46Dec 15, 2025Updated 3 months ago
- 使用Vue2.x和SpringBoot2.x实现的低代码生成器,可视化配置数据源,可在线创建数据库表结构,MyBatis和MyBatisPlus两种ORM持久层框架模板的SpringBoot项目快速构建的一站式解决方案☆20Feb 2, 2023Updated 3 years ago