scalableminds / webknossosLinks
Visualize, share and annotate your large 3D images online
☆165Updated this week
Alternatives and similar repositories for webknossos
Users that are interested in webknossos are comparing it to the libraries listed below
Sorting:
- Kaibu -- a progressive web app for visualizing and annotating multi-dimensional images.☆35Updated 10 months ago
- Read and write Neuroglancer datasets programmatically.☆171Updated last week
- ImgLib2/BDV implementation of Stitching for large datasets☆78Updated 3 months ago
- KNOSSOS is a software tool for the visualization and annotation of 3D image data and was developed for the rapid reconstruction of neural…☆77Updated 2 months ago
- Scalable Optical Flow-based Image Montaging and Alignment☆87Updated 2 weeks ago
- ☆41Updated this week
- Block-wise task scheduling for large nD volumes.☆33Updated 10 months ago
- Mastodon – a large-scale tracking and track-editing framework for large, multi-view images.☆80Updated last week
- ImJoy: Deep Learning Made Easy!☆190Updated 2 years ago
- Cookiecutter for napari plugins☆71Updated last year
- High quality visualization for volumetric image data☆56Updated this week
- Resources for teaching/preparing to teach bioimage analysis☆58Updated this week
- Collection of tools and scripts useful to automate microscopy workflows in ZEN Blue using Python and Open Application Development tools a…☆159Updated 2 weeks ago
- Next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.☆153Updated this week
- Implementation of next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.☆224Updated this week
- Reconstruct big images from overlapping tiled images on a Spark cluster.☆34Updated 2 years ago
- Project planning and material repository for the 2024 challenge to generate 1 PB of OME-Zarr data☆21Updated last month
- Collaborative Annotation Toolkit for Massive Amounts of Image Data☆197Updated last week
- ☆33Updated 9 months ago
- A napari plugin for making animations☆95Updated last week
- Accelerated Pixel and Object Classifiers (APOC)☆59Updated 6 months ago
- Scalable Neuroglancer compatible Downsampling, Meshing, Skeletonizing, Contrast Normalization, Transfers and more.☆65Updated 3 weeks ago
- A library to facilitate machine learning on multi-dimensional images.☆87Updated last week
- GPU-accelerated image processing for everyone☆55Updated last year
- Online documentation and reference for CLIJ☆28Updated 4 years ago
- Feature extraction for labeled objects in images using regionprops from scikit-image☆55Updated 9 months ago
- Discover, install, and share napari plugins☆54Updated last week
- Python API and CLI tools for working with WEBKNOSSOS datasets, annotations and server interactions. Includes converter to OME-Zarr.☆27Updated this week
- Linking napari layers with Matplotlib plots☆43Updated last week
- Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.☆34Updated last year