Alternatives and similar repositories for chunkflow

Users that are interested in chunkflow are comparing it to the libraries listed below

• seung-lab / igneous
  Scalable Neuroglancer compatible Downsampling, Meshing, Skeletonizing, Contrast Normalization, Transfers and more.
  ☆55Updated last week
• seung-lab / cloud-volume
  Read and write Neuroglancer datasets programmatically.
  ☆160Updated this week
• funkelab / gunpowder
  A library to facilitate machine learning on multi-dimensional images.
  ☆86Updated 3 weeks ago
• funkelab / daisy
  Block-wise task scheduling for large nD volumes.
  ☆32Updated 7 months ago
• seung-lab / neuroglancer
  WebGL-based viewer for volumetric data
  ☆24Updated last week
• seung-lab / fastremap
  Remap, mask, renumber, unique, and in-place transposition of 3D labeled images. Point cloud too.
  ☆63Updated last month
• e11bio / volara
  ☆43Updated 3 weeks ago
• CAVEconnectome / PyChunkedGraph
  Data backend for fast proofreading of cell segmentations in connectomics datasets
  ☆24Updated this week
• janelia-cellmap / fibsem-tools
  Tools for handling FIB-SEM data and annotations
  ☆22Updated 6 months ago
• YuelongWu / feabas
  Finite-Element Assisted Brain Assembly System for stitching & alignment of connectomics data
  ☆18Updated 3 weeks ago
• kreshuklab / MorphoFeatures
  MorphoFeatures code and data
  ☆22Updated 2 years ago
• constantinpape / elf
  Utils and convenience functions for large-scale bio-image analysis.
  ☆58Updated 2 months ago
• m-albert / MVRegFus
  Python module for registering and fusing multi-view microscopy data
  ☆23Updated 7 months ago
• funkelab / lsd
  🌈
  ☆66Updated 2 weeks ago
• JaneliaSciComp / bigstream
  Tools for distributed alignment of massive images
  ☆87Updated last month
• constantinpape / cluster_tools
  Distributed segmentation for bio-image-analysis
  ☆39Updated 5 months ago
• kirchhausenlab / incasem
  Automated Segmentation of cellular substructures in Electron Microscopy
  ☆18Updated 7 months ago
• StructuralNeurobiologyLab / SyConn
  Toolkit for the generation and analysis of volume eletron microscopy based synaptic connectomes of brain tissue.
  ☆42Updated 3 months ago
• ome / ome2024-ngff-challenge
  Project planning and material repository for the 2024 challenge to generate 1 PB of OME-Zarr data
  ☆20Updated 3 weeks ago
• seung-lab / microviewer
  Multiplatform 3D numpy image browser based viewer with voxel painting.
  ☆15Updated last week
• haesleinhuepf / apoc
  Accelerated Pixel and Object Classifiers (APOC)
  ☆58Updated 3 months ago
• juglab / napari-n2v
  A self-supervised denoising algorithm.
  ☆27Updated last year
• abcucberkeley / PetaKit5D
  ☆47Updated last week
• transformify-plugins / segmentify
  Python image segmentation plugin
  ☆31Updated 4 years ago
• NEUBIAS / training-resources
  Resources for teaching/preparing to teach bioimage analysis
  ☆58Updated 2 weeks ago
• CAVEconnectome / MeshParty
  ☆38Updated last month
• clEsperanto / napari_pyclesperanto_assistant
  GPU-accelerated general purpose image processing and image analysis in napari
  ☆35Updated 5 months ago
• reimerlab / NEURD
  NEURD: A mesh decomposition framework for automated proofreading and morphological analysis of neuronal EM reconstructions
  ☆19Updated 5 months ago
• royerlab / dexp
  Dataset EXploration & Processing
  ☆32Updated 2 years ago
• chanzuckerberg / napari-hub
  Discover, install, and share napari plugins
  ☆53Updated last week