seung-lab / chunkflowLinks
Compose chunk operators to create a pipeline for local or distributed petabyte-scale computation
☆55Updated 4 months ago
Alternatives and similar repositories for chunkflow
Users that are interested in chunkflow are comparing it to the libraries listed below
Sorting:
- Scalable Neuroglancer compatible Downsampling, Meshing, Skeletonizing, Contrast Normalization, Transfers and more.☆55Updated last week
- Read and write Neuroglancer datasets programmatically.☆160Updated this week
- A library to facilitate machine learning on multi-dimensional images.☆86Updated 3 weeks ago
- Block-wise task scheduling for large nD volumes.☆32Updated 7 months ago
- WebGL-based viewer for volumetric data☆24Updated last week
- Remap, mask, renumber, unique, and in-place transposition of 3D labeled images. Point cloud too.☆63Updated last month
- ☆43Updated 3 weeks ago
- Data backend for fast proofreading of cell segmentations in connectomics datasets☆24Updated this week
- Tools for handling FIB-SEM data and annotations☆22Updated 6 months ago
- Finite-Element Assisted Brain Assembly System for stitching & alignment of connectomics data☆18Updated 3 weeks ago
- MorphoFeatures code and data☆22Updated 2 years ago
- Utils and convenience functions for large-scale bio-image analysis.☆58Updated 2 months ago
- Python module for registering and fusing multi-view microscopy data☆23Updated 7 months ago
- 🌈☆66Updated 2 weeks ago
- Tools for distributed alignment of massive images☆87Updated last month
- Distributed segmentation for bio-image-analysis☆39Updated 5 months ago
- Automated Segmentation of cellular substructures in Electron Microscopy☆18Updated 7 months ago
- Toolkit for the generation and analysis of volume eletron microscopy based synaptic connectomes of brain tissue.☆42Updated 3 months ago
- Project planning and material repository for the 2024 challenge to generate 1 PB of OME-Zarr data☆20Updated 3 weeks ago
- Multiplatform 3D numpy image browser based viewer with voxel painting.☆15Updated last week
- Accelerated Pixel and Object Classifiers (APOC)☆58Updated 3 months ago
- A self-supervised denoising algorithm.☆27Updated last year
- ☆47Updated last week
- Python image segmentation plugin☆31Updated 4 years ago
- Resources for teaching/preparing to teach bioimage analysis☆58Updated 2 weeks ago
- ☆38Updated last month
- GPU-accelerated general purpose image processing and image analysis in napari☆35Updated 5 months ago
- NEURD: A mesh decomposition framework for automated proofreading and morphological analysis of neuronal EM reconstructions☆19Updated 5 months ago
- Dataset EXploration & Processing☆32Updated 2 years ago
- Discover, install, and share napari plugins☆53Updated last week