Alternatives and similar repositories for SegNeuron

Users that are interested in SegNeuron are comparing it to the libraries listed below

• weih527 / SSNS-Net
  Semi-Supervised Neuron Segmentation via Reinforced Consistency Learning
  ☆32Updated 3 years ago
• Limingxing00 / MitoEM2021-Challenge
  Accepted by ISBI 2022 (Oral)
  ☆39Updated 3 years ago
• weih527 / Pixel-Embedded-Affinity
  Learning to Model Pixel-Embedded Affinity for Homogeneous Instance Segmentation
  ☆12Updated 2 years ago
• windygoo / PromptNucSeg
  [ECCV 2024] Code for "Unleashing the Power of Prompt-driven Nucleus Instance Segmentation"
  ☆56Updated 11 months ago
• Luffy03 / FreeTumor
  [Nature Communications 2025] Large-Scale Generative Tumor Synthesis in Computed Tomography Images for Improving Tumor Recognition
  ☆44Updated this week
• JackieZhai / awesome-vem-datasets
  Open source volume electron microscopy (vEM) datasets for connectomics.
  ☆15Updated last year
• cvlab-stonybrook / SelfMedMAE
  Code for ISBI 2023 paper "Self Pre-training with Masked Autoencoders for Medical Image Classification and Segmentation"
  ☆155Updated last year
• weih527 / DA-ISC
  Domain Adaptive Mitochondria Segmentation via Enforcing Inter-Section Consistency
  ☆16Updated 2 years ago
• TopoXLab / TopoInteraction
  This repository contains the implementation for our work "Learning Topological Interactions for Multi-Class Medical Image Segmentation", …
  ☆83Updated last year
• JunMa11 / NeurIPS-CellSeg
  Naive baseline for microscopy image segmentation challenge in NeurIPS 2022
  ☆62Updated last year
• alibaba-damo-academy / pixel-lesion-patient-network
  ☆31Updated 2 years ago
• nstucki / Betti-matching
  ☆58Updated 7 months ago
• HuXiaoling / awesome-topology-driven-image-analysis
  awesome-topology-driven-deep-image-analysis
  ☆43Updated 2 months ago
• MIC-DKFZ / MultiTalent
  Implemention of the Paper "MultiTalent: A Multi-Dataset Approach to Medical Image Segmentation"
  ☆61Updated 4 months ago
• zhenqi-he / transnuseg
  MICCAI2023 - TransNuSeg: A Lightweight Multi-Task Transformer for Nuclei Segmentation
  ☆25Updated last year
• alibaba-damo-academy / self-supervised-anatomical-embedding-v2
  ☆72Updated last year
• Luffy03 / Large-Scale-Medical
  [TPAMI 2025] Large-Scale 3D Medical Image Pre-training with Geometric Context Priors
  ☆218Updated last week
• alexanderjaus / AtlasDataset
  ☆46Updated 11 months ago
• chenz53 / MIM-Med3D
  A repo for Masked Image Modeling for 3D Medical Images
  ☆33Updated 2 years ago
• lunit-io / ocelot23algo
  OCELOT 2023: Cell Detection from Cell-Tissue Interaction
  ☆17Updated 2 years ago
• YutingHe-list / GVSL
  ☆68Updated 2 years ago
• ASHISRAVINDRAN / stardist_pytorch
  StarDist PyTorch
  ☆47Updated 3 years ago
• BodyMaps / AbdomenAtlas2.0
  [ICCV 2025] Dataset of 10,135 CT scans with 15,130 tumors annotated across six organs and 5,893 controls. The AI ranks first in Medical S…
  ☆43Updated last month
• bowang-lab / MAESTER
  Masked Autoencoder Guided Segmentation at Pixel Resolution
  ☆17Updated 2 years ago
• hthierno / pytorch-stardist
  PyTorch implementation of 2D and 3D StarDist - Object Detection with Star-convex Shapes
  ☆26Updated 2 years ago
• MrGiovanni / R-Super
  [MICCAI 2025 Best Paper Award Runner-up] Learning Segmentation from Radiology Reports
  ☆90Updated last week
• YtongXie / UniMiSS-code
  [ECCV2022&TPAMI] Official pytorch implementation of UniMiSS & UniMiSS+
  ☆70Updated last year
• xmed-lab / MSSG
  MICCAI 2023: Morphology-inspired Unsupervised Gland Segmentation via Selective Semantic Grouping
  ☆10Updated 2 months ago
• MrGiovanni / Pixel2Cancer
  [MICCAI 2024] Cellular Automata for Tumor Development - Realistic Synthetic Tumors in Liver, Pancreas, and Kidney
  ☆44Updated 3 months ago
• LMMMEng / LLD-MMRI-Dataset
  An Open-access Dataset for Liver Lesion Diagnosis on Multi-phase MRI
  ☆32Updated 8 months ago