seung-lab / cloud-volumeLinks
Read and write Neuroglancer datasets programmatically.
☆154Updated last week
Alternatives and similar repositories for cloud-volume
Users that are interested in cloud-volume are comparing it to the libraries listed below
Sorting:
- Scalable Neuroglancer compatible Downsampling, Meshing, Skeletonizing, Contrast Normalization, Transfers and more.☆49Updated this week
- A library to facilitate machine learning on multi-dimensional images.☆82Updated 3 weeks ago
- 🌈☆57Updated 2 months ago
- Remap, mask, renumber, unique, and in-place transposition of 3D labeled images. Point cloud too.☆58Updated this week
- Toolkit for the generation and analysis of volume eletron microscopy based synaptic connectomes of brain tissue.☆41Updated 11 months ago
- Skeletonize densely labeled 3D image segmentations with TEASAR. (Medial Axis Transform)☆157Updated 2 weeks ago
- Tools for distributed alignment of massive images☆82Updated this week
- Block-wise task scheduling for large nD volumes.☆30Updated 2 months ago
- Compose chunk operators to create a pipeline for local or distributed petabyte-scale computation☆54Updated this week
- A napari plugin for making animations☆84Updated 9 months ago
- Scalable Optical Flow-based Image Montaging and Alignment☆78Updated 4 months ago
- Utils and convenience functions for large-scale bio-image analysis.☆56Updated last week
- Data backend for fast proofreading of cell segmentations in connectomics datasets☆23Updated this week
- Automated 3D brain registration with support for multiple species and atlases.☆135Updated 3 weeks ago
- KNOSSOS is a software tool for the visualization and annotation of 3D image data and was developed for the rapid reconstruction of neural…☆75Updated last month
- GPU-accelerated bio-image analysis focusing on 3D+t microscopy image data☆230Updated 4 months ago
- C++ library and command-line software for processing and analysis of terabyte-scale volume images locally or on a computing cluster.☆55Updated 2 weeks ago
- WebGL-based viewer for volumetric data☆23Updated this week
- ☆36Updated 2 months ago
- GPU-accelerated general purpose image processing and image analysis in napari☆35Updated last month
- NEURD: A mesh decomposition framework for automated proofreading and morphological analysis of neuronal EM reconstructions☆18Updated last month
- Implementation of next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.☆199Updated this week
- Read ROI files .zip or .roi generated with ImageJ.☆53Updated 3 years ago
- Connecting Java/ImgLib2 + Python/NumPy☆30Updated 2 months ago
- Next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.☆134Updated last month
- ☆25Updated last month
- www.vaa3d.org☆79Updated 7 years ago
- A napari plugin for itk-elastix☆38Updated last year
- Finite-Element Assisted Brain Assembly System for stitching & alignment of connectomics data☆16Updated this week
- A framework for easy application of established machine learning techniques on large, multi-dimensional images.☆58Updated last month