Alternatives and similar repositories for feabas

Users that are interested in feabas are comparing it to the libraries listed below

• seung-lab / igneous
  Scalable Neuroglancer compatible Downsampling, Meshing, Skeletonizing, Contrast Normalization, Transfers and more.
  ☆54Updated this week
• StructuralNeurobiologyLab / SyConn
  Toolkit for the generation and analysis of volume eletron microscopy based synaptic connectomes of brain tissue.
  ☆41Updated 2 months ago
• danionella / warpfield
  GPU-based 3D non-rigid volumetric registration
  ☆41Updated last month
• navis-org / fafbseg-py
  Tools to work with the FlyWire connectome. Fully interoperable with navis.
  ☆16Updated last month
• CAVEconnectome / nglui
  ☆12Updated last month
• JaneliaSciComp / bigstream
  Tools for distributed alignment of massive images
  ☆86Updated 3 weeks ago
• e11bio / volara
  ☆40Updated this week
• kirchhausenlab / incasem
  Automated Segmentation of cellular substructures in Electron Microscopy
  ☆18Updated 6 months ago
• guiwitz / naparimovie
  Create movies from series of key-frames in napari.
  ☆38Updated 4 years ago
• constantinpape / elf
  Utils and convenience functions for large-scale bio-image analysis.
  ☆58Updated 2 months ago
• CAVEconnectome / PyChunkedGraph
  Data backend for fast proofreading of cell segmentations in connectomics datasets
  ☆24Updated last month
• seung-lab / cloud-volume
  Read and write Neuroglancer datasets programmatically.
  ☆159Updated this week
• JaneliaSciComp / VVDViewer
  3D/4D volumetric rendering of microscopy data
  ☆26Updated 5 months ago
• reimerlab / NEURD
  NEURD: A mesh decomposition framework for automated proofreading and morphological analysis of neuronal EM reconstructions
  ☆19Updated 4 months ago
• funkelab / motile
  Multi-Object Tracker using Integer Linear Equations
  ☆38Updated last week
• seung-lab / chunkflow
  Compose chunk operators to create a pipeline for local or distributed petabyte-scale computation
  ☆55Updated 3 months ago
• funkelab / gunpowder
  A library to facilitate machine learning on multi-dimensional images.
  ☆86Updated this week
• acquire-project / acquire-python
  Acquire: a multi-camera video streaming software focusing on microscopy
  ☆22Updated 11 months ago
• janelia-cellmap / fibsem-tools
  Tools for handling FIB-SEM data and annotations
  ☆22Updated 6 months ago
• abcucberkeley / PetaKit5D
  ☆46Updated last week
• funkelab / daisy
  Block-wise task scheduling for large nD volumes.
  ☆32Updated 6 months ago
• ekatrukha / BigTrace
  FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets
  ☆30Updated 2 weeks ago
• jasper-tms / the-BANC-fly-connectome
  Information and python tools for the GridTape-TEM dataset of an adult female fly's Brain And Nerve Cord
  ☆14Updated last week
• m-albert / MVRegFus
  Python module for registering and fusing multi-view microscopy data
  ☆23Updated 7 months ago
• nadavyayon / Intensify3D
  Intensify3D is an image normalization tool for large scale fluorescent imaging. It corrects heterogeneities in the signal (defined by the…
  ☆19Updated 4 years ago
• tlambert03 / microsim
  ☆40Updated this week
• napari / napari-animation
  A napari plugin for making animations
  ☆88Updated last week
• bioimage-io / spec-bioimage-io
  Specification for the bioimage.io model description file.
  ☆21Updated this week
• allen-cell-animated / agave
  ☆51Updated this week
• ome / ome2024-ngff-challenge
  Project planning and material repository for the 2024 challenge to generate 1 PB of OME-Zarr data
  ☆20Updated last week