Shared repo for EM connectomics and Array Tomography render based image processing modules
☆17Mar 2, 2026Updated 2 months ago
Alternatives and similar repositories for asap-modules
Users that are interested in asap-modules are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A set of tools to assist in aligning (registering) large numbers of EM images into a coherent image volume in two and three dimensions.☆16Apr 13, 2019Updated 7 years ago
- Render transformed image tiles☆36May 7, 2026Updated 2 weeks ago
- NEURD: A mesh decomposition framework for automated proofreading and morphological analysis of neuronal EM reconstructions☆26Feb 24, 2026Updated 2 months ago
- Information and python tools for the GridTape-TEM dataset of an adult female fly's Brain And Nerve Cord☆18Updated this week
- Tools to work with the FlyWire connectome. Fully interoperable with navis.☆22Feb 20, 2026Updated 3 months ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- ☆12Mar 18, 2024Updated 2 years ago
- Optimization of single-cell biophysically detailed models☆15Jul 17, 2020Updated 5 years ago
- Cuda/C++ library for Regularized 2D and 3D Tomography Reconstructions.☆22Aug 28, 2025Updated 8 months ago
- Data backend for fast proofreading of cell segmentations in connectomics datasets☆27Updated this week
- Open source volume electron microscopy (vEM) datasets for connectomics.☆17Nov 13, 2024Updated last year
- Read and write Neuroglancer datasets programmatically.☆173Apr 24, 2026Updated 3 weeks ago
- WebGL-based viewer for volumetric data☆25May 13, 2026Updated last week
- Finite-Element Assisted Brain Assembly System for stitching & alignment of connectomics data☆26May 14, 2026Updated last week
- Umbrella package to help install/load nat packages☆11Mar 9, 2026Updated 2 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- ☆18Updated this week
- Code for processing and analyzing the automated reconstruction of the Lee lab's Female Adult Nerve Cord EM dataset☆15May 6, 2026Updated 2 weeks ago
- The official NodeJS driver for the Cyton board over Serial.☆16Feb 18, 2019Updated 7 years ago
- A basis for a napari plugin for manually correcting cell segmentation in 3D (z, y, x) or 4D (t, z, y, x) (virtual) arrays.☆10Mar 6, 2026Updated 2 months ago
- Distributed segmentation for bio-image-analysis☆42Jan 18, 2026Updated 4 months ago
- scripts for using spark on janelia's cluster☆12Nov 12, 2023Updated 2 years ago
- Deep Learning for EM Connectomics☆16Aug 18, 2022Updated 3 years ago
- ☆10May 14, 2026Updated last week
- CODEX data processing code☆12Jul 1, 2025Updated 10 months ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- This is the python client for accessing REST APIs within the Connectome Annotation Versioning Engine.☆36May 14, 2026Updated last week
- Uncertainty-Aware Label Rectification for Domain Adaptive Mitochondria Segmentation in MICCAI 2021☆14Jun 22, 2021Updated 4 years ago
- ☆11Dec 26, 2017Updated 8 years ago
- BigDataViewer-based tool for visualizing multichannel multiscale N5 datasets.☆19May 8, 2026Updated last week
- STED simulation platform written in Python☆14Oct 4, 2024Updated last year
- Performance benchmarks of Zarr V3 implementations☆19Feb 8, 2026Updated 3 months ago
- This repository contains smart contracts for Intial Token Sale (Crowdsale of BCDC Tokens)☆13Nov 30, 2017Updated 8 years ago
- Masked Autoencoder Guided Segmentation at Pixel Resolution☆17Oct 3, 2023Updated 2 years ago
- Miscellaneous scripts for processing cryo-ET data☆22Feb 25, 2025Updated last year
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- A simple program for taking open source personality tests.☆12Oct 23, 2015Updated 10 years ago
- This repository contains the entire pipline (including data preprocessing, training, testing, evaluation and visualization) for the Shear…☆11Dec 3, 2019Updated 6 years ago
- ☆13May 11, 2026Updated last week
- ☆22Jan 6, 2026Updated 4 months ago
- ☆10Oct 20, 2021Updated 4 years ago
- Azure CognitiverSearch and Bing with ChatGPT to provide internal/external information chatbot☆18Jul 31, 2023Updated 2 years ago
- Deep convolutional neural networks to restore single-shot electron microscopy images☆48Apr 15, 2026Updated last month