☆35Mar 30, 2025Updated last year
Alternatives and similar repositories for HistoPlexer
Users that are interested in HistoPlexer are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆22Jul 21, 2025Updated last year
- This repository provides the dataset HEMIT for H&E to mIHC image-to-image translation task☆27Dec 11, 2024Updated last year
- MIPHEI-ViT: Repository to train Image-to-Image H&E to Immunofluorescence models☆58Apr 7, 2026Updated 4 months ago
- ☆71Feb 11, 2026Updated 6 months ago
- Official repository for Characterization of tumor heterogeneity through segmentation-free representation learning on multiplexed imaging …☆16Jul 17, 2026Updated 3 weeks ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- A generative toolkit to translate H&E images to multiplexed IHC☆69Dec 11, 2024Updated last year
- Foundation Model for Multiplex Spatial Proteomic Images☆212Jul 27, 2026Updated 2 weeks ago
- ☆15May 24, 2025Updated last year
- [MICCAI 2024]Official implementation of "Pathological Semantics-Preserving Learning for H&E-to-IHC Virtual Staining"☆42Apr 22, 2026Updated 3 months ago
- Amgad M, Salgado R, Cooper LA. A panoptic segmentation approach for tumor-infiltrating lymphocyte assessment: development of the MuTILs m…☆28Feb 6, 2026Updated 6 months ago
- A visual–omics foundation model to bridge histopathology with spatial transcriptomics☆147Jun 3, 2025Updated last year
- Feature extraction from GEOJson nuclei and tissue segmentation maps☆19Jun 23, 2025Updated last year
- ☆61Apr 26, 2022Updated 4 years ago
- ☆72Sep 16, 2025Updated 10 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆14May 28, 2025Updated last year
- The source code for "High-Parameter Spatial Multi-Omics through Histology-Anchored Integration"☆39May 15, 2026Updated 2 months ago
- ☆22Feb 5, 2025Updated last year
- Codes for the paper "Super-resolved Virtual Staining of Label-free Tissue Using Diffusion Models"☆30Apr 15, 2025Updated last year
- ☆20Apr 8, 2025Updated last year
- Highly accurate prediction of single-cell spatial transcriptomics from histology images☆27May 31, 2026Updated 2 months ago
- Code from our publications☆20Feb 6, 2026Updated 6 months ago
- [Nature Biomedical Engineering]This is the official code repo for the paper: spEMO: Exploring the Capacity of Foundation Models for Analy…☆22May 9, 2026Updated 3 months ago
- Python package for reading imaging mass cytometry (IMC) files☆20Updated this week
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Spatial Expression-Aligned Learning to improve pathology foundation models☆48Feb 17, 2026Updated 5 months ago
- HCC_Deep_learning☆18Jun 8, 2020Updated 6 years ago
- ☆14Aug 13, 2025Updated last year
- Flow2Spatial reconstructs spatial proteomics through transfer learning.☆25May 16, 2025Updated last year
- Preprocessing module for large histological images☆22Jun 16, 2023Updated 3 years ago
- ☆44Jun 3, 2026Updated 2 months ago
- ☆219Jul 23, 2025Updated last year
- Machine learning for Analysis of Proteomics in Spatial biology - Nature Communications☆68Mar 14, 2024Updated 2 years ago
- Pathology Foundation Model - Nature Medicine☆765Mar 26, 2025Updated last year
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Leveraging Digital Pathology Foundation Models to characterize the tumor microenvironment (TME)☆36Nov 24, 2025Updated 8 months ago
- Code Repository for AAAI23 paper "Weakly-Supervised Semantic Segmentation for Histopathology Images Based on Dataset Synthesis and Featur…☆13Jun 23, 2024Updated 2 years ago
- ☆88Jul 7, 2026Updated last month
- An Interactive Image Segmentation Filter for Multiplex Microscopy☆35Aug 5, 2026Updated last week
- Scaling up spatial transcriptomics for large-sized tissues: uncovering cellular-level tissue architecture beyond conventional platforms☆50Oct 22, 2025Updated 9 months ago
- A package that performs cell type annotations on single cell resolution of spatial transcriptomics data, find the niche interactions and …☆16Updated this week
- Accessible and interoperable whole slide image analysis☆316Jul 28, 2026Updated 2 weeks ago