sandialabs / RUBRICLinks
☆12Updated 6 years ago
Alternatives and similar repositories for RUBRIC
Users that are interested in RUBRIC are comparing it to the libraries listed below
Sorting:
- Mumemto: multi-MUM and MEM finding across pangenomes☆104Updated 3 weeks ago
- TGS scaffolding☆46Updated 3 years ago
- Call select base modifications in PacBio HiFi reads☆10Updated 6 months ago
- Pipeline to convert a haploid assembly into diploid☆102Updated 6 months ago
- ☆63Updated 2 weeks ago
- ☆77Updated 5 years ago
- A tool for evaluate long-read de novo assembly results☆48Updated 11 months ago
- TSEBRA: Transcript Selector for BRAKER☆47Updated 8 months ago
- Splitting of sequence reads by internal adapter sequence search☆51Updated 2 years ago
- Tool for assessing/improving assembly quality in extra-long tandem repeats☆46Updated 4 years ago
- A tool for evaluating long-read de novo assembly results☆37Updated 11 months ago
- ☆116Updated last week
- Identification of errors in draft genome assemblies with single-base pair resolution for quality assessment and improvement☆65Updated 2 weeks ago
- Graphical interactive tool for the visualization of sequence graphs in GFA format.☆70Updated 6 years ago
- A python script for finding telomeric repeats (TTAGGG/CCCTAA) in FASTA files☆34Updated 3 years ago
- A Circos-based tool to visualize genome assembly consistency or synteny between assemblies.☆82Updated 8 months ago
- A program to call variants from genome alignment☆81Updated 3 months ago
- HyPo: Super Fast & Accurate Polisher for Long Read Genome Assemblies☆64Updated 5 years ago
- A tool for the recovery of unassembled telomeres from soft-clipped read alignments.☆41Updated 3 months ago
- Detecting multi-genome synteny using minimizer graph mapping☆79Updated 3 months ago
- Adapter trimmer for Oxford Nanopore reads using ab initio method☆45Updated 8 months ago
- Panacus is a tool for computing statistics for GFA-formatted pangenome graphs☆111Updated this week
- Show pangenome graphs in an easy way☆56Updated last week
- Assemblies from HPP Year 1 production☆76Updated 2 years ago
- A fast tool for hybrid genome assembly of long and short reads☆78Updated 5 years ago
- calling SVs from Blasr contig level alignments☆54Updated 7 years ago
- Tool for globally phasing diploid assembly graphs with orthogonal data☆40Updated 8 months ago
- finshingTool☆54Updated 8 years ago
- Identification of transposable element families from pangenome polymorphisms