☆12Dec 26, 2018Updated 7 years ago
Alternatives and similar repositories for RUBRIC
Users that are interested in RUBRIC are comparing it to the libraries listed below
Sorting:
- ☆13Nov 15, 2017Updated 8 years ago
- Hardware Accelerated Read Until☆17Sep 30, 2025Updated 5 months ago
- SAPLING: Suffix Array Piecewise Linear INdex for Genomics☆25Sep 1, 2020Updated 5 years ago
- Read Until client library for Nanopore Sequencing☆109Sep 25, 2024Updated last year
- De novo clustering of long transcript reads into genes☆70Apr 27, 2025Updated 10 months ago
- Version II of Mandalorion☆32Feb 1, 2019Updated 7 years ago
- Supplementary Files☆10Mar 16, 2019Updated 6 years ago
- Remove primer sequence from BAM alignments by soft-clipping☆30Dec 5, 2019Updated 6 years ago
- Python bindings to bwa mem☆32Mar 26, 2020Updated 5 years ago
- A benchmark suite to study the performance characteristics of genomics applications☆32Oct 21, 2024Updated last year
- The source code of "A Novel Image Tamper Detection and Self-recovery Algorithm Based on Watermarking and Chaotic System"☆11Apr 22, 2021Updated 4 years ago
- Create a pseudohaploid assembly from a partially resolved diploid assembly☆32Nov 22, 2019Updated 6 years ago
- Phased structural variant discovery in pangenomes☆39Dec 9, 2025Updated 2 months ago
- Simple library/pipeline to generate and handle Hi-C data.☆39Feb 13, 2026Updated 2 weeks ago
- ☆12Mar 11, 2025Updated 11 months ago
- Strand and WGD aware syntenic gene identification☆15Oct 16, 2025Updated 4 months ago
- ☆10Jun 13, 2020Updated 5 years ago
- Bioinformatics / Explore oligonucleotide composition similarity between assembly contigs or scaffolds to detect contaminant DNA.☆12Feb 27, 2019Updated 7 years ago
- CGM 主站☆11Mar 10, 2025Updated 11 months ago
- ☆11Feb 16, 2021Updated 5 years ago
- Automated Rice Variant calling workflow for HPC, Cloud and Desktop systems.☆13May 11, 2024Updated last year
- an interactive visualization and interpretation framework of reference-projected pangenome graphs☆37Feb 15, 2025Updated last year
- ☆12Jan 27, 2023Updated 3 years ago
- ☆49Sep 4, 2025Updated 6 months ago
- MetaPORE – Chiu Laboratory, University of California, San Francisco☆12Nov 4, 2015Updated 10 years ago
- Biodiversity Genomics Academy 2023: Understanding k-mers and ploidy using Smudgeplot☆11Sep 12, 2023Updated 2 years ago
- Python deployment tool for bespoke image curation projects, oriented toward scientific projects. Please cite https://academic.oup.com/gig…☆13Aug 6, 2022Updated 3 years ago
- Code used to process and analyze structural variants and short tandem repeat variants profiled in 719 deeply sequenced whole genomes as p…☆11Jun 25, 2019Updated 6 years ago
- A terminal-based renderer for OpenGL shaders. Like Shadertoy, but in the terminal.☆12Sep 24, 2023Updated 2 years ago
- 将速铂下载工具进行封装,以便高效方便地批量下载SRA测序数据。☆10Sep 1, 2020Updated 5 years ago
- Analysis tool for NG-Capture-C, Tri-C and Tiled-C data☆10Oct 13, 2025Updated 4 months ago
- ☆11Feb 4, 2026Updated last month
- A barcode demultiplexer for Oxford Nanopore long-read amplicon sequencing data☆10Nov 27, 2024Updated last year
- Scripts used in the publication Tyler P. Barnum, Israel A. Figueroa, Charlotte I. Carlström, Lauren N. Lucas, Anna L. Engelbrektson, and …☆10Jun 19, 2019Updated 6 years ago
- Files for the Genome Design/Genome Analytics Short-course organized by the SBRG☆10Nov 30, 2021Updated 4 years ago
- Galaxy Docker Image for the HiCExplorer☆11Mar 3, 2019Updated 7 years ago
- ☆17Oct 7, 2024Updated last year
- ☆12Apr 8, 2021Updated 4 years ago
- Reference-free quality assessment for Hi-C sequencing data☆13Apr 30, 2024Updated last year