saeyslab / FlowCytometryScripts
☆24Updated 8 years ago
Related projects ⓘ
Alternatives and complementary repositories for FlowCytometryScripts
- R scripts to reproduce analyses in our paper comparing clustering methods for high-dimensional cytometry data☆44Updated 7 years ago
- SPADE: Spanning Tree Progression of Density Normalized Events☆46Updated 8 years ago
- R Codebase for BISCUIT: Infinite Mixture Model to cluster and impute single cells.☆65Updated 6 years ago
- VorteX Clustering Environment - Java graphical tool for single-cell analysis, clustering and visualization. Latest release:☆35Updated last year
- consistent quantification of external RNA-seq data sets☆58Updated 10 months ago
- An R client for broads firehose pipeline, providing TCGA data sets☆60Updated 5 years ago
- Algorithm for the inference of cell types from single-cell RNA-seq data.☆43Updated 8 years ago
- ☆53Updated 3 weeks ago
- An archived version of the scater repository, see https://github.com/davismcc/scater for the active version.☆64Updated 7 years ago
- Rphenograph: R implementation of the PhenoGraph algorithm☆47Updated 4 years ago
- easy access to benchmark datasets☆50Updated 6 years ago
- An R Package for Geneset Enrichment Workflows☆76Updated 5 months ago
- Tools for manipulating annotated data matrices☆85Updated 3 years ago
- ☆60Updated 4 years ago
- ☆14Updated 6 months ago
- R package for pre-processing of mass and flow cytometry data☆42Updated 2 years ago
- Citrus Development Code☆31Updated 6 months ago
- An R-based interface for loom files☆63Updated 4 years ago
- Genoppi: an open-source software for robust and standardized integration of proteomic and genetic data☆27Updated 5 months ago
- A tool for unsupervised projection of single cell RNA-seq data☆89Updated 3 years ago
- cytofkit: an integrated flow/mass cytometry data analysis pipeline☆57Updated 3 years ago
- Explore and share your scRNAseq clustering results☆46Updated last year
- ☆67Updated 6 years ago
- A set of tools supporting the development, execution, and benchmarking of trajectory inference methods. 🌍☆72Updated 3 years ago
- Quick access to gene synonyms☆26Updated last week
- Human transcription factor target genes from 6 databases in convenient R format.☆86Updated 6 years ago
- My notes/usage examples for various Bioconductor packages☆15Updated 7 years ago
- PHATE dimensionality reduction method implemented in R☆77Updated 3 years ago
- ARCHS4 RNA-seq processing scripts and web server pages.☆54Updated 3 years ago
- Tutorials, workflows, and convenience scripts for Single Cell Portal☆47Updated 8 months ago