RGLab / openCytoLinks
A package that provides data analysis pipeline for flow cytometry.
☆79Updated 4 months ago
Alternatives and similar repositories for openCyto
Users that are interested in openCyto are comparing it to the libraries listed below
Sorting:
- Topics In Data Science and Bioinformatics☆79Updated last year
- Visualize Cytometry data with ggplot2☆63Updated 3 months ago
- cytofkit: an integrated flow/mass cytometry data analysis pipeline☆59Updated 5 years ago
- Interactive Cytometry Data Analysis☆67Updated last month
- An R Package for Geneset Enrichment Workflows☆76Updated 3 weeks ago
- Clone of the Bioconductor repository for the scater package.☆96Updated 10 months ago
- Quantify and interpret divers of variation in multilevel gene expression experiments☆69Updated last month
- Identify and correct invalid gene symbols☆60Updated last year
- Human transcription factor target genes from 6 databases in convenient R format.☆86Updated 7 years ago
- Clone of the Bioconductor repository for the SingleCellExperiment package, see https://bioconductor.org/packages/devel/bioc/html/SingleCe…☆75Updated 6 months ago
- Enjoy your transcriptomic data and analysis responsibly - like sipping a cocktail☆79Updated last month
- Bioconductor package for management of multi-assay data☆74Updated last month
- Power analysis is essential to optimize the design of RNA-seq experiments and to assess and compare the power to detect differentially ex…☆107Updated 2 years ago
- An R interface to enrichR☆93Updated 11 months ago
- PHATE dimensionality reduction method implemented in R☆81Updated 4 years ago
- The bridge between the NCBI Gene Expression Omnibus and Bioconductor☆103Updated last month
- consistent quantification of external RNA-seq data sets☆58Updated 2 years ago
- Integrate the cancer genomics portal, cBioPortal, using MultiAssayExperiment☆33Updated last month
- Fit Gamma-Poisson Generalized Linear Models Reliably☆119Updated 9 months ago
- ☆55Updated 10 months ago
- Using Bulk Gene Expression to Estimate Cell-Type-Specific Gene Expression via Deconvolution☆47Updated 2 years ago
- Statistical approach for removing unwanted variation from multiple single-cell datasets☆68Updated last year
- BASiCS: Bayesian Analysis of Single-Cell Sequencing Data. This is an unstable experimental version. Please see http://bioconductor.org/pa…☆85Updated 3 months ago
- ☆16Updated last year
- MSigDB gene sets for multiple organisms in a tidy data format☆84Updated 5 months ago
- scDataviz: single cell dataviz and downstream analyses☆65Updated 4 years ago
- Unsupervised correction of gene independent cell responses to CRISPR-cas9☆53Updated 2 years ago
- Brings SingleCellExperiment objects to the tidyverse☆36Updated last month
- Lightweight Iterative Gene set Enrichment in R☆57Updated last year
- An archived version of the scater repository, see https://github.com/davismcc/scater for the active version.☆64Updated 8 years ago