RGLab / openCytoLinks
A package that provides data analysis pipeline for flow cytometry.
☆79Updated last month
Alternatives and similar repositories for openCyto
Users that are interested in openCyto are comparing it to the libraries listed below
Sorting:
- Topics In Data Science and Bioinformatics☆79Updated last year
- Interactive Cytometry Data Analysis☆67Updated last week
- Human transcription factor target genes from 6 databases in convenient R format.☆86Updated 7 years ago
- cytofkit: an integrated flow/mass cytometry data analysis pipeline☆58Updated 4 years ago
- Quantify and interpret divers of variation in multilevel gene expression experiments☆67Updated last month
- Visualize Cytometry data with ggplot2☆61Updated 3 weeks ago
- Power analysis is essential to optimize the design of RNA-seq experiments and to assess and compare the power to detect differentially ex…☆107Updated 2 years ago
- Clone of the Bioconductor repository for the SingleCellExperiment package, see https://bioconductor.org/packages/devel/bioc/html/SingleCe…☆74Updated 3 months ago
- Fit Gamma-Poisson Generalized Linear Models Reliably☆116Updated 6 months ago
- Identify and correct invalid gene symbols☆59Updated 10 months ago
- An R Package for Geneset Enrichment Workflows☆76Updated 3 weeks ago
- Statistical approach for removing unwanted variation from multiple single-cell datasets☆67Updated last year
- BASiCS: Bayesian Analysis of Single-Cell Sequencing Data. This is an unstable experimental version. Please see http://bioconductor.org/pa…☆84Updated 3 weeks ago
- An R interface to enrichR☆93Updated 8 months ago
- R Codebase for BISCUIT: Infinite Mixture Model to cluster and impute single cells.☆66Updated 7 years ago
- Clone of the Bioconductor repository for the scater package.☆97Updated 7 months ago
- ☆55Updated 7 months ago
- Mixed-effect model to test differences in cell type proportions from single-cell data, in R☆111Updated 3 weeks ago
- Bioconductor package for management of multi-assay data☆72Updated last month
- Linseed: LINear Subspace identification for gene Expresion Deconvolution☆31Updated last month
- The bridge between the NCBI Gene Expression Omnibus and Bioconductor☆100Updated last month
- Lightweight Iterative Gene set Enrichment in R☆57Updated last year
- PHATE dimensionality reduction method implemented in R☆81Updated 4 years ago
- consistent quantification of external RNA-seq data sets☆58Updated last year
- Rphenograph: R implementation of the PhenoGraph algorithm☆48Updated 5 years ago
- ☆16Updated last year
- An R/Bioconductor package that implements a single-sample molecular phenotyping approach☆45Updated 2 weeks ago
- Simplify functional enrichment results☆118Updated last year
- Explore and share your scRNAseq clustering results☆50Updated 2 years ago
- Using Bulk Gene Expression to Estimate Cell-Type-Specific Gene Expression via Deconvolution☆47Updated 2 years ago