LIMMA (an empirical Bayes method) pipeline for two group comparison in a proteomic experiment
☆32Nov 23, 2023Updated 2 years ago
Alternatives and similar repositories for LIMMA-pipeline-proteomics
Users that are interested in LIMMA-pipeline-proteomics are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A Python implementation of Baffling Recursive Algorithm for Isotopic distributioN calculations☆23May 22, 2025Updated last year
- Immune evasion before tumor invasion in early squamous lung cell carcinogenesis☆17Jul 19, 2021Updated 4 years ago
- Pipeline that runs two-sample Mendelian randomization on molecular QTLs and GWAS loci and tests for horizontal pleiotropy.☆26Nov 18, 2023Updated 2 years ago
- ☆16Feb 23, 2021Updated 5 years ago
- ☆26Oct 27, 2017Updated 8 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Code to reproduce analysis and figures for 'Genetic mapping of etiologic brain cell types for obesity' (Timshel, eLife 2020)☆14May 20, 2021Updated 5 years ago
- ☆119Mar 9, 2016Updated 10 years ago
- Proteomic Data Analysis with Python (pandas, scikit-learn, numpy, scipy)☆24Jul 6, 2023Updated 2 years ago
- A python package for protein inference in Mass Spectrometric data analysis.☆10Jun 6, 2022Updated 3 years ago
- Deep neural network based prediction model for gene essentiality prediction in microbes☆10Feb 11, 2021Updated 5 years ago
- Course Materials for Genomics Data Mining☆22Apr 4, 2026Updated last month
- Instant Clue - Interactive Data Analysis☆21Apr 9, 2025Updated last year
- ☆15May 31, 2020Updated 5 years ago
- Jupyter notebook repository for reproducing analysis in "DNA Methylation Landscape of the Mouse Brain at Single-Cell Resolution"☆14Apr 1, 2020Updated 6 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ProtGraph - A Graph-Generator for Proteins☆13Mar 4, 2026Updated 2 months ago
- Robust statistical inference for quantitative LC-MS proteomics☆33Dec 6, 2022Updated 3 years ago
- The project data analysis code☆21Aug 6, 2024Updated last year
- Subgraph for Curve.fi☆10Mar 20, 2021Updated 5 years ago
- ☆12Apr 21, 2016Updated 10 years ago
- An R package of High-resolution Informatics Toolbox for Maldi-imaging Proteomics☆19Oct 2, 2025Updated 7 months ago
- A collection of functions compatible with the Opentrons API☆10Oct 28, 2022Updated 3 years ago
- Transcription Factor Enrichment Analysis☆37Apr 10, 2026Updated last month
- The curatedOvarianData package provides data for gene expression analysis in patients with ovarian cancer☆12May 14, 2026Updated 2 weeks ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Core utilities for single-cell RNA-seq☆13Apr 6, 2026Updated last month
- python scripts for proteogenomics analysis☆10Oct 17, 2019Updated 6 years ago
- MAss spectra alignment tool for MSI data☆20Jun 6, 2022Updated 3 years ago
- Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"☆16Apr 22, 2019Updated 7 years ago
- DNA and RNA variant calling pipelines with HLA typing and Neoantigen predictions☆11Jul 8, 2021Updated 4 years ago
- Computational biology utility scripts☆19Apr 16, 2025Updated last year
- Processing and analysis of proteomics data☆17May 14, 2026Updated 2 weeks ago
- ImageJ/Fiji plugin to skeletonize binary images☆19Jun 14, 2022Updated 3 years ago
- SeqWho - A reliable and rapid FASTQ(A) file classifier☆11Jan 21, 2022Updated 4 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆12Mar 5, 2024Updated 2 years ago
- Cell cycle analysis of single-cell proteomic and transcriptomic data for the FUCCI cell model☆14Oct 19, 2023Updated 2 years ago
- call copy number from WES(WXS)☆11May 10, 2021Updated 5 years ago
- ☆12Mar 7, 2022Updated 4 years ago
- Python-based web scraper for extracting gene summaries from GeneCards.☆12Oct 3, 2024Updated last year
- 这是一个本地优先的 AI 求职训练工作台，集成了 AI 模拟面试、实时语音交互、评估报告、简历优化、简历生成和职业规划等功能。它既可以作为 Web 项目调试，也可以直接打包成桌面应用使用，目标就是把求职训练这件事做成一套真正可用、可持续迭代的工具。☆53May 13, 2026Updated 2 weeks ago
- The ProteoCancer Analysis Suite (PCAS) utilizes the CPTAC database to integrate proteomics, phosphoproteomics, and transcriptomics for ca…☆21Jun 18, 2025Updated 11 months ago