uc-bd2k / GREIN
GREIN : GEO RNA-seq Experiments Interactive Navigator
☆49Updated 5 years ago
Alternatives and similar repositories for GREIN:
Users that are interested in GREIN are comparing it to the libraries listed below
- 2017_2018 single cell RNA sequencing Workshop UCD_UCB_UCSF☆36Updated 6 years ago
- COSMOS (Causal Oriented Search of Multi-Omic Space) is a method that integrates phosphoproteomics, transcriptomics, and metabolomics data…☆59Updated 2 weeks ago
- R package for analysing proteomics data☆49Updated last year
- ☆47Updated 2 years ago
- ☆38Updated 2 weeks ago
- A continually expanding collection of RNA-seq tools☆48Updated 5 months ago
- This is a tutorial to guide the analysis of RNAseq dataset using footprint based tools such as DOROTHEA, PROGENY and CARNIVAL☆55Updated last year
- Wrapper R scripts for performing a weighted-gene co-expression network analysis (WGCNA)☆28Updated 9 years ago
- A standalone interactive application for detecting biological significance on a set of genes☆40Updated 3 years ago
- This github repository contains code to reproduce the analysis in our paper "Variability in estimated gene expression among commonly used…☆28Updated last year
- 🏺 Exploring novel tumor epitope identification☆35Updated 4 years ago
- Integrative analysis pipeline for pooled CRISPR functional genetic screens☆29Updated last year
- R package providing query functionality to BioMart instances like Ensembl☆39Updated last week
- Statistical power studies for multi-omics experiments.☆30Updated 2 months ago
- ☆11Updated 6 years ago
- ☆53Updated this week
- 🧬 Gene analysis toolkit based on R☆56Updated 2 months ago
- documentation for trackViewer☆29Updated 5 years ago
- collection of notebooks with different cytoscape workflows☆49Updated 2 years ago
- R client for the REACTOME Analysis Service for comparative multi-omics gene set analysis☆22Updated 3 months ago
- ISCB DC Area Regional Student Group - Summer 2016 Workshop☆48Updated 8 years ago
- Explore the cancer relevance of your gene list☆50Updated 3 weeks ago
- Bulk-Sequence Single-Cell Gene Expression Deconvolution Pipeline☆45Updated last year
- This repository contains course materials from JAX-BD2K workshop.☆31Updated 5 years ago
- Personal notes about work- and coding-related topics☆20Updated 2 years ago
- DEAPP shiny App☆30Updated 2 years ago
- ⚙️ Matching T-cell repertoire against a database of TCR antigen specificities☆38Updated 6 years ago
- Cancer Dependency Map package☆28Updated 7 months ago
- Code and additional processed data for manuscript "Tumor and Microenvironment Evolution during Immunotherapy with Nivolumab"; see for man…☆51Updated 7 years ago
- CAusal Reasoning for Network Identification with integer VALue programming in R☆57Updated last year