JinmiaoChenLab / RphenographLinks
Rphenograph: R implementation of the PhenoGraph algorithm
☆49Updated 5 years ago
Alternatives and similar repositories for Rphenograph
Users that are interested in Rphenograph are comparing it to the libraries listed below
Sorting:
- Identify and correct invalid gene symbols☆60Updated last year
- Multi-sample Unified Discriminant ANalysis☆74Updated 2 years ago
- Reproducible pipeline for "Comprehensive evaluation of cell-type quantification methods for immuno-oncology", Sturm et al. 2019, https://…☆43Updated 5 years ago
- scDataviz: single cell dataviz and downstream analyses☆64Updated 4 years ago
- ☆43Updated 4 years ago
- An R-based interface for loom files☆67Updated 5 years ago
- cytofkit: an integrated flow/mass cytometry data analysis pipeline☆58Updated 4 years ago
- ☆55Updated 9 months ago
- Compendium to "A Systematic Evaluation of Single Cell RNA-Seq Analysis Pipelines"☆55Updated 4 years ago
- Linear trajectory inference for single-cell RNA-seq☆61Updated last year
- Toolbox with R scripts☆38Updated 7 years ago
- An R Package for Geneset Enrichment Workflows☆76Updated 2 months ago
- ☆55Updated 4 years ago
- A General Framework for Consensus Partitioning☆63Updated 9 months ago
- Explore and share your scRNAseq clustering results☆50Updated 2 years ago
- Repository for the R package EPIC, to Estimate the Proportion of Immune and Cancer cells from bulk gene expression data.☆84Updated 2 years ago
- ConsensusTME Gene Sets and R Script☆39Updated last year
- Normalize CITEseq Data☆66Updated last week
- Clone of the Bioconductor repository for the scater package.☆96Updated 8 months ago
- Algorithm for the inference of cell types from single-cell RNA-seq data.☆45Updated 9 years ago
- An R/Bioconductor package that implements a single-sample molecular phenotyping approach☆45Updated last month
- Clone of the Bioconductor repository for the batchelor package.☆18Updated 8 months ago
- An r package that works as a wrapper to homologene☆46Updated 2 years ago
- Statistical approach for removing unwanted variation from multiple single-cell datasets☆68Updated last year
- Power analysis is essential to optimize the design of RNA-seq experiments and to assess and compare the power to detect differentially ex…☆107Updated 2 years ago
- Harvard FAS informatics scRNAseq workshop website☆38Updated 6 years ago
- Single-cell Scalable Visualization and Analytics☆26Updated 6 years ago
- Clone of the Bioconductor repository for the scran package.☆45Updated last year
- Single-cell/nuclei RNA-seq analysis tools in R for a complete workflow.☆57Updated last year
- supporting code for the multinomial single cell RNA-Seq paper☆52Updated 4 years ago