MCMCtree tutorials
☆28May 27, 2024Updated last year
Alternatives and similar repositories for Tutorial_MCMCtree
Users that are interested in Tutorial_MCMCtree are comparing it to the libraries listed below
Sorting:
- Support material for the "Comparative Genomics Laboratory" classes of the MSc in Biodiversity and Evolution at the University of Bologna.☆13Jan 13, 2026Updated last month
- Tutorial for using MCMCTree as implemented by Brown Lab at SIUC. For divergence time estimation on UCE datasets, for dendrobatid frogs.☆10Jun 19, 2020Updated 5 years ago
- Methods for the analyses described in Álvarez-Carretero et al. 2022 (https://doi.org/10.1038/s41586-021-04341-1)☆20Dec 15, 2025Updated 2 months ago
- ☆12Jun 12, 2023Updated 2 years ago
- Scripts for Shi et al. (2024). The suer-pangenome of Populus unveils genomic facets for its adaptation and diversification in widespread …☆18Apr 1, 2024Updated last year
- Characterization of Structural Variation in Chinese samples☆18Dec 22, 2021Updated 4 years ago
- a tool to identify species and inter-species hybrids and chromosome copy number variants from short-read data☆19Sep 13, 2019Updated 6 years ago
- ☆16Jan 6, 2022Updated 4 years ago
- The Vertebrate Genomes Project Mitogenome Assembly Pipeline☆19Mar 26, 2023Updated 2 years ago
- ☆24Dec 15, 2025Updated 2 months ago
- Methods and recipes for Plant Genome Annotation - Transposable Elements☆20Jun 10, 2025Updated 8 months ago
- BUSCOMP: BUSCO Compiler and Comparison tool☆21Sep 19, 2024Updated last year
- Scripts to analyze data using TreeMix. This pipeline runs TreeMix with bootstrapping, helps choose number of migration events and creates…☆42Mar 7, 2024Updated last year
- reference-free estimation of ploidy level from whole genome sequencing data based on de Bruijn graph☆18Jul 26, 2023Updated 2 years ago
- ☆44Jul 23, 2025Updated 7 months ago
- PhyloForge: Unifying micro and macro evolution with comprehensive genomic signals☆10May 17, 2024Updated last year
- Postprocessing gadgets for output generated by RevBayes☆14Feb 22, 2026Updated last week
- Scripts in R for Landscape Genomics Analyses v.2☆10Feb 17, 2023Updated 3 years ago
- ☆10Jun 13, 2020Updated 5 years ago
- ☆41Jun 8, 2023Updated 2 years ago
- FFT cross-correlation based synteny aligner, (re)designed to make full use of parallel computing☆45Dec 21, 2021Updated 4 years ago
- PAML is a package of programs for phylogenetic analyses of DNA or protein sequences using maximum likelihood. Please report only **techni…☆183Jan 29, 2026Updated last month
- ☆26Mar 23, 2024Updated last year
- Yet another Hi-C scaffolding tool☆22Oct 23, 2024Updated last year
- Newick tree processing☆13Feb 22, 2026Updated last week
- ☆14Nov 17, 2025Updated 3 months ago
- Programs for performing various population genetic analyses☆11Dec 2, 2024Updated last year
- Homologizer: phasing gene copies into polyploid subgenomes☆11Feb 3, 2026Updated 3 weeks ago
- ☆13Nov 15, 2017Updated 8 years ago
- ☆17Oct 7, 2024Updated last year
- Telomere compliment tools☆22Nov 17, 2025Updated 3 months ago
- A pipeline creation tool using Snakemake☆12Feb 20, 2026Updated last week
- GeneMiner: a tool for extracting phylogenetic markers from next-generation sequencing data☆12Feb 22, 2024Updated 2 years ago
- Estimating gene family turnover rates by likelihood-based methods☆12Aug 17, 2020Updated 5 years ago
- Tree reconstruction of ancestry using incomplete lineage sorting☆11Jan 9, 2026Updated last month
- ☆11Feb 4, 2026Updated 3 weeks ago
- Multi-genome synteny block visualization tool☆55Updated this week
- ☆27Aug 29, 2025Updated 6 months ago
- ☆43Apr 2, 2024Updated last year