sabifo4 / Tutorial_MCMCtreeLinks
MCMCtree tutorials
☆27Updated last year
Alternatives and similar repositories for Tutorial_MCMCtree
Users that are interested in Tutorial_MCMCtree are comparing it to the libraries listed below
Sorting:
- A Python package for testing evolutionary hypotheses in genome-wide approaches.☆32Updated 4 years ago
- reference-free estimation of ploidy level from whole genome sequencing data based on de Bruijn graph☆18Updated 2 years ago
- ☆45Updated 3 years ago
- Multi-genome synteny block visualization tool☆50Updated last month
- Plant genome assembly and annotation pipeline using snakemake☆48Updated 6 months ago
- A shiny application to visualize MCscan result☆37Updated 3 years ago
- wgd v2: a suite of tools to uncover and date ancient polyploidy and whole-genome duplication☆37Updated 9 months ago
- A genome assembly assessment pipeline.☆37Updated 2 years ago
- MCMCtreeR: A package to estimate distribution values for temporal node constraints and prepare input files for MCMCtree☆45Updated 6 years ago
- We developed GenomeSyn as a new tool for constructing and visualizing genome synteny, its novel design and implementation can serve as a …☆31Updated 3 years ago
- BITACORA: A Bioinformatics tool for gene family annotation☆49Updated 6 months ago
- An R package to identify and classify duplicated genes from whole-genome protein sequence data☆29Updated 2 months ago
- Pan-genome Construction and Population Structure Variation Calling pipeline☆44Updated last year
- Dynamic Elongation of a Genome Assembly Path☆22Updated last year
- ☆40Updated 4 months ago
- Genome Annotation Pipeline☆42Updated last year
- ☆41Updated 2 years ago
- Resistify is a program which rapidly identifies and classifies plant resistance genes from protein sequences. It is designed to be lightw…☆40Updated last week
- Robust identification of orthologous Synteny with the Orthology Index☆35Updated last month
- scripts for the project of seven thaliana genomes assembly☆42Updated 4 years ago
- Guide through code for a Minimmap2 genome alignment and a seq-seq-pan pan-genome alignment with visualizations in R. The tutorial present…☆19Updated 6 months ago
- Sorting and subsampling phylogenomic datasets☆27Updated 8 months ago
- A quick user guide for de novo transposable element (TE) library generation and TE screening. Utilising; the Extensive de novo TE Annotat…☆27Updated 3 years ago
- Likelihood-based Selective Sweep Detection☆40Updated 2 years ago
- Integrate multiple genome assemblies into a pangenome graph☆35Updated 3 years ago
- Computational Analysis of Gene Expression Evolution☆44Updated 3 months ago
- Convergent substitution detection tool based on the PCOC model☆31Updated 4 years ago
- This is a method to find telomeres and centromeres in plants.☆42Updated 2 years ago
- Yet another Hi-C scaffolding tool☆22Updated last year
- ☆24Updated 3 weeks ago