ClearVolume is a real-time live 3D visualization library designed for high-end volumetric microscopes such as SPIM and DLSM microscopes. With ClearVolume you can see live on your screen the stacks acquired by your microscope instead of waiting for offline post-processing to give you an intuitive and comprehensive view on your data.
☆46Feb 18, 2025Updated last year
Alternatives and similar repositories for clearvolume
Users that are interested in clearvolume are comparing it to the libraries listed below
Sorting:
- python bindings to the ClearVolume project that enables serving numpy data from within python to the renderer.☆15Jan 24, 2017Updated 9 years ago
- simple standalone BigDataViewer for multiple N5 (or HDF5) datasets☆12Mar 6, 2026Updated 2 weeks ago
- ☆21Mar 11, 2026Updated last week
- ☆112Feb 19, 2026Updated last month
- ImageJ convenience layer for N5☆19Mar 12, 2026Updated last week
- Create 3D/4D animations using a natural language-based syntax☆61Jun 6, 2025Updated 9 months ago
- A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher☆17Mar 4, 2026Updated 2 weeks ago
- PSFj - Know your microscope fluorescence☆24Mar 6, 2020Updated 6 years ago
- Flexible VR Visualisation for Volumetric and Geometric Data on the Java VM, powered by Kotlin and Vulkan.☆136Mar 5, 2026Updated 2 weeks ago
- GPU Deconvolution Library with C and Matlab API for nVidia GPUs☆21Mar 2, 2019Updated 7 years ago
- ☆22Aug 17, 2023Updated 2 years ago
- ImgLib2/BDV implementation of Stitching for large datasets☆80Mar 11, 2026Updated last week
- Microscope control and image acquisition integrated with ImageJ☆299Updated this week
- AutoPilot library☆15Nov 15, 2016Updated 9 years ago
- Helpers to use BigDataViewer as a quick visualization tool in other projects.☆25Jun 13, 2024Updated last year
- ☆15Feb 5, 2025Updated last year
- GPU accelerated 3D image deconvolution using CUDA☆39Jul 18, 2024Updated last year
- Java library for scientific image computing☆16Feb 4, 2021Updated 5 years ago
- ImgLib2 integration for ClearVolume☆12Feb 17, 2025Updated last year
- A high content analysis method to study skeletal muscle☆12Apr 26, 2024Updated last year
- An Ilastik-like interactive pixel classifier.☆16Sep 5, 2024Updated last year
- CLIJ is deprecated. Visit CLIJ2☆56Jun 12, 2021Updated 4 years ago
- A portal for viewing FIB-SEM datasets☆13Updated this week
- ☆13Jun 27, 2025Updated 8 months ago
- This Toolbox is build for 3D correlative microscopy. It helps with 3D to 2D correlation of three dimensional confocal image stacks to two…☆12Apr 27, 2020Updated 5 years ago
- Image processing algorithms for ImgLib2☆23Feb 21, 2026Updated last month
- Creating figures and animations for multi-channel images with a focus on microscopy.☆80Dec 16, 2024Updated last year
- sciview is a tool for visualization and interaction with ND image and mesh data☆73Feb 26, 2026Updated 3 weeks ago
- A tool for fast automatic 3D-stitching of teravoxel-sized microscopy images☆93Mar 5, 2024Updated 2 years ago
- Image Cytometry Standard file reading and writing.☆18Jan 5, 2026Updated 2 months ago
- ☆10Mar 15, 2024Updated 2 years ago
- mcib3d core library for 3D ImageJ suite☆15Oct 6, 2022Updated 3 years ago
- A napari Plugin for visualisaton of pixel values over time (t+ nD) as graphs.☆13Apr 24, 2024Updated last year
- A plugin to read whole slide images within napari.☆21Nov 24, 2025Updated 3 months ago
- Fusing image tiles with dask array's map_blocks☆31Feb 27, 2024Updated 2 years ago
- Home of the ImageJ BAR: A collection of Broadly Applicable Routines for ImageJ☆26Jun 3, 2022Updated 3 years ago
- napari plugin for trackastra☆17Nov 12, 2025Updated 4 months ago
- ☆24Sep 13, 2025Updated 6 months ago
- An ImageJ script to align and stitch three-dimensional tiles and quickly explore terabyte-sized microscopy datasets☆13Feb 22, 2022Updated 4 years ago