Create 3D/4D animations using a natural language-based syntax
☆61Jun 6, 2025Updated 8 months ago
Alternatives and similar repositories for 3Dscript
Users that are interested in 3Dscript are comparing it to the libraries listed below
Sorting:
- CLIJ is deprecated. Visit CLIJ2☆56Jun 12, 2021Updated 4 years ago
- ☆20Feb 19, 2026Updated last week
- ABBA - Aligning Big Brains and Atlases (2D sections to 3D atlas registration)☆56Feb 2, 2026Updated 3 weeks ago
- Helpers to use BigDataViewer as a quick visualization tool in other projects.☆25Jun 13, 2024Updated last year
- Various parts made for fluorescence microscopy + optics work☆16Jul 22, 2019Updated 6 years ago
- Dataset EXploration & Processing☆33May 11, 2023Updated 2 years ago
- ImgLib2-based viewer for registered SPIM stacks and more☆41Jan 9, 2026Updated last month
- Python package for writing 5D numpy arrays to HDF5 files readable by both Imaris and BigDataViewer☆12Aug 13, 2021Updated 4 years ago
- ☆14Jan 25, 2024Updated 2 years ago
- Commands and Classes for interfacing between Imaris and Fiji☆13Sep 30, 2024Updated last year
- Lattice light-sheet post-processing utility.☆30Feb 2, 2026Updated 3 weeks ago
- Online documentation and reference for CLIJ☆28May 21, 2021Updated 4 years ago
- Library for producing and processing on the Adaptive Particle Representation (APR).☆51Jan 20, 2026Updated last month
- Archived: control, reconstruction, and analysis code for oblique plane microscopy.☆22Apr 1, 2025Updated 10 months ago
- ☆15Feb 5, 2025Updated last year
- ☆112Feb 19, 2026Updated last week
- ClearVolume is a real-time live 3D visualization library designed for high-end volumetric microscopes such as SPIM and DLSM microscopes. …☆46Feb 18, 2025Updated last year
- Software for the reconstruction of multi-view microscopic acquisitions like Selective Plane Illumination Microscopy (SPIM) Data☆32Updated this week
- A napari plugin to load & deskew folders of lattice light sheet TIFFs☆13Jan 5, 2026Updated last month
- AutoTx - an intelligent background file transfer service for Windows.☆28Feb 13, 2026Updated 2 weeks ago
- Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy☆71Feb 2, 2026Updated 3 weeks ago
- mcib3d core library for 3D ImageJ suite☆15Oct 6, 2022Updated 3 years ago
- Create movies from series of key-frames in napari.☆38May 24, 2021Updated 4 years ago
- Accelerated Pixel and Object Classifiers (APOC)☆60Jul 18, 2025Updated 7 months ago
- ☆17Jan 13, 2025Updated last year
- simple standalone BigDataViewer for multiple N5 (or HDF5) datasets☆12Mar 27, 2025Updated 11 months ago
- Fiji macro for cutting confocal stacks at various depths relative to surface signal☆10Sep 28, 2020Updated 5 years ago
- A JupyterBook site for napari workshop materials☆10Jul 11, 2022Updated 3 years ago
- C and NVidia CUDA code for multi-view deconvolution☆11Jul 25, 2016Updated 9 years ago
- Prototype implementation of napari-integrated CNN training viewer☆14Dec 27, 2024Updated last year
- ☆10Nov 29, 2024Updated last year
- python tools for BigDataViewer☆22Dec 29, 2024Updated last year
- Multi-handle range slider widget for PyQt/PySide☆47Jun 28, 2021Updated 4 years ago
- Simple Maven project for an ImageJ2 command☆34Apr 11, 2022Updated 3 years ago
- 3D Structured illumination microscopy (3D-SIM) reconstruction software☆32Oct 2, 2024Updated last year
- Python based viewer for large mulit-dimensional datasets.☆20Jan 28, 2020Updated 6 years ago
- ☆13Sep 13, 2021Updated 4 years ago
- Icons describing multiple microscopy techniques, as used by https://www.epfl.ch/research/facilities/ptbiop/equipment/☆11Mar 13, 2023Updated 2 years ago
- Code for simulating a multi-view acquisition including attenuation, convolution, reduced sampling and poission noise☆13Jun 14, 2022Updated 3 years ago