Block-wise operations for large nD volumes
☆46Apr 1, 2026Updated last week
Alternatives and similar repositories for volara
Users that are interested in volara are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- dask empowered fast4dreg☆16Mar 11, 2026Updated last month
- SciCount is tool focused on counting and classifying of objects in image-like data and scientific images, with training and example datas…☆11Oct 24, 2023Updated 2 years ago
- Napari plugin for custom analysis and visualization of lattice lightsheet and Oblique Plane Microscopy data. The plugin is optimized for …☆14Mar 30, 2026Updated 2 weeks ago
- scalable multiscale image pyramids in python☆29Jul 25, 2024Updated last year
- Guides and code for 3D nuclear instance segmentation☆23Dec 2, 2025Updated 4 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- A collection of Image Processing and Analysis (IPA) functions used at the Facility for Advanced Imaging and Microscopy (FAIM)☆20Apr 6, 2026Updated last week
- Block-wise task scheduling for large nD volumes.☆33Mar 17, 2026Updated 3 weeks ago
- Running compute-intense parts of BigStitcher distributed☆30Updated this week
- ☆12Feb 23, 2026Updated last month
- Generate a multiscale, chunked, multi-dimensional spatial image data structure that can serialized to OME-NGFF.☆55Nov 13, 2025Updated 5 months ago
- A basis for a napari plugin for manually correcting cell segmentation in 3D (z, y, x) or 4D (t, z, y, x) (virtual) arrays.☆10Mar 6, 2026Updated last month
- Affinity based segmentation algorithms and tools☆10May 12, 2025Updated 11 months ago
- Deep learning based spot detection for FISH images.☆34Jan 7, 2026Updated 3 months ago
- 🌈☆67Oct 10, 2025Updated 6 months ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Basic example of using OME-Zarr in a Nextflow pipeline☆21Jul 15, 2025Updated 8 months ago
- Mastodon – a large-scale tracking and track-editing framework for large, multi-view images.☆82Feb 3, 2026Updated 2 months ago
- ☆23Mar 26, 2021Updated 5 years ago
- Scalable Optical Flow-based Image Montaging and Alignment☆95Mar 2, 2026Updated last month
- 4D reconstruction of developmental trajectories using spherical harmonics☆23Mar 25, 2025Updated last year
- ☆42Apr 1, 2026Updated 2 weeks ago
- serve Zarr datasets via HTTP☆31Jun 12, 2023Updated 2 years ago
- A python package for fitting splines.☆23Updated this week
- ☆12Jun 29, 2021Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆12May 6, 2024Updated last year
- A plugin to visualise 3D spatial single cell omics☆20Oct 22, 2025Updated 5 months ago
- ☆21Apr 8, 2026Updated last week
- CUDA-accelerated 3D BioImage Computing (ICCV BIC 2025)☆30Apr 3, 2026Updated last week
- FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets☆29Updated this week
- Project planning and material repository for the 2024 challenge to generate 1 PB of OME-Zarr data☆21Jan 9, 2026Updated 3 months ago
- Transformer-based cell tracking for live-cell microscopy☆128Mar 31, 2026Updated 2 weeks ago
- Panoptic segmentation algorithms for 2D and 3D electron microscopy in napari☆33Mar 24, 2026Updated 3 weeks ago
- Automatically annotate cell types, consistently across samples.☆20Apr 6, 2026Updated last week
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Annotation of filaments and other curvilinear structures in 3D.☆12Oct 9, 2023Updated 2 years ago
- A collection of resources on bioimage analysis and related tools and techniques☆14Apr 28, 2023Updated 2 years ago
- ☆13Dec 7, 2021Updated 4 years ago
- ☆37Mar 22, 2024Updated 2 years ago
- Paint segmentations directly to on-disk/remote zarr arrays☆16Mar 25, 2026Updated 2 weeks ago
- Cookiecutter for napari plugins☆73Nov 6, 2024Updated last year
- A minimal Python package for reading, writing and validating OME-Zarr (meta)data☆37Mar 24, 2026Updated 3 weeks ago