Block-wise operations for large nD volumes
☆45Oct 29, 2026Updated this week
Alternatives and similar repositories for volara
Users that are interested in volara are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Block-wise task scheduling for large nD volumes.☆34Updated this week
- Basic example of using OME-Zarr in a Nextflow pipeline☆21Jul 15, 2025Updated last year
- Automated batch processing of tissue microscopy image data with a text-based interface☆10Mar 24, 2026Updated 7 months ago
- Browse, share, and publish OME-Zarr data☆30Updated this week
- scalable multiscale image pyramids in python☆29Aug 5, 2026Updated 2 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- A multi-dimensional spatial image data structure for scientific Python.☆45Aug 8, 2025Updated last year
- Create web-based OME-Zarr galleries☆31Jul 7, 2026Updated 3 months ago
- Generate a multiscale, chunked, multi-dimensional spatial image data structure that can serialized to OME-NGFF.☆58Nov 13, 2025Updated 11 months ago
- A deep learning based method to uncover brain learning rules from behavior or neural experimental data.☆18Dec 18, 2024Updated last year
- Scalable Optical Flow-based Image Montaging and Alignment☆103Oct 5, 2026Updated 3 weeks ago
- Tiled processing of arbitrarily large images — any image, any function.☆19Updated this week
- A library to facilitate machine learning on multi-dimensional images.☆93Oct 5, 2026Updated 3 weeks ago
- Generate multiresolution neuroglancer meshes and skeletons from segmentation volumes (zarr, N5, precomputed), parallelized with Dask.☆13Updated this week
- ☆20Updated this week
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Volumetric data viewer in Jupyter notebooks with HoloViz Panel and Neuroglancer☆13Feb 4, 2025Updated last year
- ☆45Oct 20, 2026Updated last week
- serve Zarr datasets via HTTP☆32Jun 12, 2023Updated 3 years ago
- ☆14Updated this week
- Official implementation of MuViT (CVPR 2026), a ViT-based architecture for multi-scale modelling of gigapixel microscopy images.☆49Jun 7, 2026Updated 4 months ago
- Annotation of filaments and other curvilinear structures in 3D.☆12Oct 9, 2023Updated 3 years ago
- GPU-based 3D non-rigid volumetric registration☆49Aug 26, 2025Updated last year
- A framework for easy application of established machine learning techniques on large, multi-dimensional images.☆61Apr 24, 2026Updated 6 months ago
- Morphological features from images and masks made easy.☆53Updated this week
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Tools for handling FIB-SEM data and annotations☆21Apr 4, 2025Updated last year
- High quality visualization for volumetric image data☆63Oct 23, 2026Updated last week
- Guides and code for 3D nuclear instance segmentation☆25Dec 2, 2025Updated 11 months ago
- Light microscopy simulation in python.☆57Oct 26, 2026Updated last week
- Deep learning based spot detection for FISH images.☆35Jan 7, 2026Updated 9 months ago
- Comprehensive platform for automated large-scale connectomics. Segmentation and Detection models built upon Funke lab's algorithms.☆14Oct 9, 2026Updated 3 weeks ago
- PyTorch Implementation of Global Neuron Shape Reasoning with Point Affinity Transformers☆14Updated this week
- Fast reconstruction of spatial networks from bioimages.☆26Mar 27, 2026Updated 7 months ago
- Simple, fast-loading, n-dimensional array viewer with minimal dependencies.☆98Oct 6, 2026Updated 3 weeks ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A nextflow based tool that wraps bfconvert and bioformats2raw to convert image data collections to OME-TIFF and OME-Zarr, respectively, i…☆31Mar 14, 2025Updated last year
- Affinity based segmentation algorithms and tools☆12May 12, 2025Updated last year
- SciCount is tool focused on counting and classifying of objects in image-like data and scientific images, with training and example datas…☆11Oct 24, 2023Updated 3 years ago
- An introduction to OME-Zarr for big bioimaging data☆28Oct 1, 2026Updated last month
- A collection of Image Processing and Analysis (IPA) functions used at the Facility for Advanced Imaging and Microscopy (FAIM)☆20Oct 26, 2026Updated last week
- A tool for proofreading and refining synaptic polarity annotations in electron microscopy volumes.☆11Oct 7, 2026Updated 3 weeks ago
- ilastik plugin for napari☆15Mar 2, 2026Updated 8 months ago