Block-wise task scheduling for large nD volumes.
β32Aug 5, 2026Updated this week
Alternatives and similar repositories for daisy
Users that are interested in daisy are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A library to facilitate machine learning on multi-dimensional images.β92Aug 3, 2026Updated last week
- πβ70Oct 10, 2025Updated 10 months ago
- Block-wise operations for large nD volumesβ45Updated this week
- Tools for handling FIB-SEM data and annotationsβ21Apr 4, 2025Updated last year
- Scalable Optical Flow-based Image Montaging and Alignmentβ96Updated this week
- Managed Kubernetes at scale on DigitalOcean β’ AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Neurotransmitter prediction from EM.β17Feb 28, 2025Updated last year
- simple package for augmentation of n-dimensional arraysβ33Aug 10, 2023Updated 3 years ago
- The digital sphinx: Can a worm brain control a fly body?β18May 22, 2026Updated 2 months ago
- Affinity based segmentation algorithms and toolsβ12May 12, 2025Updated last year
- Browse, share, and publish OME-Zarr dataβ29Updated this week
- Tools to work with the FlyWire connectome. Fully interoperable with navis.β24Jul 9, 2026Updated last month
- β17Feb 3, 2018Updated 8 years ago
- Volumetric data obtained with focused ion beam combined with scanning electron microscopy (FIB-SEM) and labels for mitochondria, endolysoβ¦β13May 15, 2023Updated 3 years ago
- Running compute-intense parts of BigStitcher distributedβ31Updated this week
- Deploy to Railway using AI coding agents - Free Credits Offer β’ AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- View connectomic data stored in neuPrintβ28Jul 15, 2026Updated 3 weeks ago
- scalable multiscale image pyramids in pythonβ29Updated this week
- 3D dense segmentation compression codec based on crack codes.β17Aug 1, 2026Updated last week
- Training and evaluation scripts for MALA (https://arxiv.org/abs/1709.02974).β11Jun 23, 2021Updated 5 years ago
- β62Updated this week
- A framework for easy application of established machine learning techniques on large, multi-dimensional images.β61Apr 24, 2026Updated 3 months ago
- Automated Segmentation of cellular substructures in Electron Microscopyβ18Jan 28, 2026Updated 6 months ago
- Simple watershed and agglomeration library for affinity graphs.β30Sep 18, 2025Updated 10 months ago
- Data backend for fast proofreading of cell segmentations in connectomics datasetsβ27Updated this week
- GPUs on demand by Runpod - Special Offer Available β’ AdRun AI, ML, and HPC workloads on powerful cloud GPUsβwithout limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Python-based Human-In-the-LOop Workflow: PHILOW is an interactive deep learning-based platform for 3D datasetsβ27Feb 17, 2025Updated last year
- β43Sep 1, 2025Updated 11 months ago
- Open source rodent behavior measurement and controlβ19Jul 5, 2017Updated 9 years ago
- Read and write Neuroglancer datasets programmatically.β175Aug 4, 2026Updated last week
- β116Updated this week
- Resources for Heinrich et al., 2021β20May 28, 2021Updated 5 years ago
- Python SDK for interacting with the BossDB REST APIβ23Apr 18, 2025Updated last year
- Cookiecutter for napari pluginsβ73Nov 6, 2024Updated last year
- Generalized algorithm for agglomerative clustering of signed graphsβ15Dec 16, 2021Updated 4 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer β’ AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- a lazy-loading, fancy-sliceable iterableβ18Jun 30, 2025Updated last year
- NEURD: A mesh decomposition framework for automated proofreading and morphological analysis of neuronal EM reconstructionsβ27Feb 24, 2026Updated 5 months ago
- Utilities for computing common accuracy metrics on cell tracking solutions with ground truthβ41Updated this week
- Not HDF5β204Jul 28, 2026Updated last week
- MorphoFeatures code and dataβ23May 11, 2026Updated 2 months ago
- Panoptic segmentation algorithms for 2D and 3D electron microscopy in napariβ34Aug 3, 2026Updated last week
- PyTorch Connectomics: segmentation toolbox for EM connectomicsβ198Updated this week