Block-wise task scheduling for large nD volumes.
☆32Apr 14, 2026Updated 2 weeks ago
Alternatives and similar repositories for daisy
Users that are interested in daisy are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A library to facilitate machine learning on multi-dimensional images.☆89Apr 22, 2026Updated last week
- 🌈☆67Oct 10, 2025Updated 6 months ago
- Tools for handling FIB-SEM data and annotations☆21Apr 4, 2025Updated last year
- Scalable Optical Flow-based Image Montaging and Alignment☆95Mar 2, 2026Updated last month
- simple package for augmentation of n-dimensional arrays☆34Aug 10, 2023Updated 2 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Neurotransmitter prediction from EM.☆16Feb 28, 2025Updated last year
- Affinity based segmentation algorithms and tools☆10May 12, 2025Updated 11 months ago
- Tools to work with the FlyWire connectome. Fully interoperable with navis.☆21Feb 20, 2026Updated 2 months ago
- PyTorch Implementation of Global Neuron Shape Reasoning with Point Affinity Transformers☆13Mar 16, 2026Updated last month
- View connectomic data stored in neuPrint☆26Apr 17, 2026Updated 2 weeks ago
- ☆17Feb 3, 2018Updated 8 years ago
- Running compute-intense parts of BigStitcher distributed☆30Apr 24, 2026Updated last week
- scalable multiscale image pyramids in python☆29Jul 25, 2024Updated last year
- Multi-Object Tracking with Integer Linear Equations☆39Apr 14, 2026Updated 2 weeks ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Automated Segmentation of cellular substructures in Electron Microscopy☆18Jan 28, 2026Updated 3 months ago
- A framework for easy application of established machine learning techniques on large, multi-dimensional images.☆60Apr 24, 2026Updated last week
- Utilities for computing common accuracy metrics on cell tracking solutions with ground truth☆39Apr 22, 2026Updated last week
- NEURD: A mesh decomposition framework for automated proofreading and morphological analysis of neuronal EM reconstructions☆25Feb 24, 2026Updated 2 months ago
- Panoptic segmentation algorithms for 2D and 3D electron microscopy in napari☆33Mar 24, 2026Updated last month
- Python-based Human-In-the-LOop Workflow: PHILOW is an interactive deep learning-based platform for 3D datasets☆26Feb 17, 2025Updated last year
- Template for creating a new python repository☆13Sep 28, 2025Updated 7 months ago
- ☆41Sep 1, 2025Updated 8 months ago
- Python SDK for interacting with the BossDB REST API☆23Apr 18, 2025Updated last year
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- ☆112Apr 13, 2026Updated 2 weeks ago
- Read and write Neuroglancer datasets programmatically.☆171Apr 24, 2026Updated last week
- A nifty library for graph based image segmentation.☆47May 3, 2025Updated 11 months ago
- Generalized algorithm for agglomerative clustering of signed graphs☆13Dec 16, 2021Updated 4 years ago
- Open source rodent behavior measurement and control☆18Jul 5, 2017Updated 8 years ago
- Cookiecutter for napari plugins☆73Nov 6, 2024Updated last year
- Not HDF5☆201Updated this week
- MorphoFeatures code and data☆22May 4, 2023Updated 2 years ago
- Resources for Heinrich et al., 2021☆19May 28, 2021Updated 4 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Transformer-based cell tracking for live-cell microscopy☆130Mar 31, 2026Updated last month
- a lazy-loading, fancy-sliceable iterable☆18Jun 30, 2025Updated 10 months ago
- PyTorch Connectomics: segmentation toolbox for EM connectomics☆191Updated this week
- Toolkit for the generation and analysis of volume eletron microscopy based synaptic connectomes of brain tissue.☆44Jul 28, 2025Updated 9 months ago
- ☆15Mar 26, 2024Updated 2 years ago
- ☆41Jul 23, 2024Updated last year
- ☆53Apr 14, 2026Updated 2 weeks ago