constantinpape / z5Links
Lightweight C++ and Python interface for datasets in zarr and N5 format
☆128Updated 8 months ago
Alternatives and similar repositories for z5
Users that are interested in z5 are comparing it to the libraries listed below
Sorting:
- Not HDF5☆193Updated 3 weeks ago
- Set of compression filters for h5py☆76Updated last month
- Implementation of the Zarr core protocol (version 2 and 3) based on xtensor.☆47Updated 3 years ago
- The RPC library used in ImJoy.☆25Updated last year
- Remap, mask, renumber, unique, and in-place transposition of 3D labeled images. Point cloud too.☆63Updated 3 weeks ago
- Simple, fast-loading, n-dimensional array viewer with minimal dependencies.☆87Updated this week
- Zarr core protocol for storage and retrieval of N-dimensional typed arrays☆103Updated 3 months ago
- A dataset for loading zarr files to be used in machine learning training pipelines☆34Updated this week
- Pydantic models for OME-NGFF☆24Updated 3 months ago
- A library to facilitate machine learning on multi-dimensional images.☆87Updated last week
- scalable multiscale image pyramids in python☆29Updated last year
- GPU accelerated image/volume processing in Python☆113Updated 8 months ago
- Distributed image processing☆225Updated 3 weeks ago
- Python based viewer for large mulit-dimensional datasets.☆20Updated 5 years ago
- ☆42Updated last year
- Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.☆34Updated last year
- Library for producing and processing on the Adaptive Particle Representation (APR).☆51Updated 2 weeks ago
- serve Zarr datasets via HTTP☆31Updated 2 years ago
- A 3D interactivity toolbox for napari☆37Updated 6 months ago
- A CodecPipeline for zarr-python backed by the zarrs Rust crate☆59Updated this week
- ☆17Updated 3 weeks ago
- ☆24Updated 3 months ago
- Zarr filesystem backend for N5☆17Updated 3 weeks ago
- A writer and reader for NGFF OME-Zarr datasets☆14Updated 4 years ago
- Project planning and material repository for the 2024 challenge to generate 1 PB of OME-Zarr data☆20Updated 3 months ago
- A python script editor plugin for napari☆11Updated 2 years ago
- Pythonic and parallelizable I/O for N-dimensional imaging data with OME metadata☆47Updated this week
- Python module for registering and fusing multi-view microscopy data☆24Updated 10 months ago
- Remote Frame Buffer for Jupyter☆81Updated 2 months ago
- Discover, install, and share napari plugins☆54Updated 3 weeks ago