constantinpape / z5Links
Lightweight C++ and Python interface for datasets in zarr and N5 format
☆120Updated 3 months ago
Alternatives and similar repositories for z5
Users that are interested in z5 are comparing it to the libraries listed below
Sorting:
- Not HDF5☆184Updated last week
- Implementation of the Zarr core protocol (version 2 and 3) based on xtensor.☆45Updated 3 years ago
- Set of compression filters for h5py☆74Updated 4 months ago
- Simple, fast-loading, n-dimensional array viewer with minimal dependencies.☆81Updated last week
- The RPC library used in ImJoy.☆25Updated last year
- Remap, mask, renumber, unique, and in-place transposition of 3D labeled images. Point cloud too.☆61Updated 2 weeks ago
- Distributed image processing☆219Updated 2 months ago
- A dataset for loading zarr files to be used in machine learning training pipelines☆34Updated 2 months ago
- A library to facilitate machine learning on multi-dimensional images.☆85Updated last week
- Zarr filesystem backend for N5☆16Updated last week
- Python based viewer for large mulit-dimensional datasets.☆20Updated 5 years ago
- ☆41Updated last year
- Pydantic models for OME-NGFF☆24Updated last week
- serve Zarr datasets via HTTP☆31Updated 2 years ago
- GPU accelerated image/volume processing in Python☆111Updated 3 months ago
- Remote Frame Buffer for Jupyter☆80Updated 2 months ago
- Library for producing and processing on the Adaptive Particle Representation (APR).☆49Updated this week
- scalable multiscale image pyramids in python☆28Updated last year
- A 3D interactivity toolbox for napari☆37Updated last month
- Generate a multiscale, chunked, multi-dimensional spatial image data structure that can serialized to OME-NGFF.☆47Updated this week
- Pythonic and parallelizable I/O for N-dimensional imaging data with OME metadata☆39Updated this week
- ☆49Updated this week
- Project planning and material repository for the 2024 challenge to generate 1 PB of OME-Zarr data☆19Updated 2 months ago
- Python module for registering and fusing multi-view microscopy data☆23Updated 5 months ago
- A minimal Zarr image viewer based on Viv.☆158Updated last week
- Scientific colormaps for python, with only numpy dependency☆126Updated last week
- A lean and kind Open Microscopy Environment (OME) Next Generation File Format (NGFF) Zarr implementation.☆49Updated this week
- Discover, install, and share napari plugins☆52Updated last month
- ☆17Updated 3 months ago
- ☆22Updated 2 weeks ago