constantinpape / z5Links
Lightweight C++ and Python interface for datasets in zarr and N5 format
☆127Updated 6 months ago
Alternatives and similar repositories for z5
Users that are interested in z5 are comparing it to the libraries listed below
Sorting:
- Not HDF5☆191Updated last week
- Implementation of the Zarr core protocol (version 2 and 3) based on xtensor.☆46Updated 3 years ago
- Remap, mask, renumber, unique, and in-place transposition of 3D labeled images. Point cloud too.☆63Updated last month
- Set of compression filters for h5py☆76Updated last week
- The RPC library used in ImJoy.☆25Updated last year
- Simple, fast-loading, n-dimensional array viewer with minimal dependencies.☆86Updated 2 weeks ago
- A library to facilitate machine learning on multi-dimensional images.☆86Updated this week
- Library for producing and processing on the Adaptive Particle Representation (APR).☆51Updated last week
- Python based viewer for large mulit-dimensional datasets.☆20Updated 5 years ago
- GPU accelerated image/volume processing in Python☆112Updated 7 months ago
- Distributed image processing☆223Updated last week
- A dataset for loading zarr files to be used in machine learning training pipelines☆34Updated 5 months ago
- Pydantic models for OME-NGFF☆24Updated 2 months ago
- Zarr filesystem backend for N5☆17Updated 2 weeks ago
- ☆41Updated last year
- Content-adaptive storage and processing of large volumetric microscopy data using the Adaptive Particle Representation (APR)☆20Updated last year
- scalable multiscale image pyramids in python☆29Updated last year
- Remote Frame Buffer for Jupyter☆80Updated 2 weeks ago
- serve Zarr datasets via HTTP☆31Updated 2 years ago
- ☆17Updated 7 months ago
- Generate a multiscale, chunked, multi-dimensional spatial image data structure that can serialized to OME-NGFF.☆54Updated last week
- A 3D interactivity toolbox for napari☆37Updated 4 months ago
- Discover, install, and share napari plugins☆54Updated 3 weeks ago
- CuPy implementations of image and signal processing functions from NumPy, SciPy and scikit-image☆46Updated 4 years ago
- A multidimensional data container on top of Blosc2.☆44Updated 2 years ago
- Block-wise task scheduling for large nD volumes.☆32Updated 7 months ago
- Pythonic and parallelizable I/O for N-dimensional imaging data with OME metadata☆40Updated this week
- A writer and reader for NGFF OME-Zarr datasets☆14Updated 4 years ago
- A python script editor plugin for napari☆11Updated 2 years ago
- Python module for registering and fusing multi-view microscopy data☆23Updated 8 months ago