Alternatives and similar repositories for pycudadecon

Users that are interested in pycudadecon are comparing it to the libraries listed below

• CellMigrationLab / Fast4DReg
  Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…
  ☆39Updated last month
• QI2lab / OPM
  Archived: control, reconstruction, and analysis code for oblique plane microscopy.
  ☆22Updated 2 months ago
• BiAPoL / napari-clusters-plotter
  A napari plugin for clustering objects according to their properties.
  ☆85Updated last week
• haesleinhuepf / apoc
  Accelerated Pixel and Object Classifiers (APOC)
  ☆56Updated 3 months ago
• nvladimus / npy2bdv
  Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.
  ☆35Updated 9 months ago
• AndrewGYork / tools
  Things we use regularly
  ☆29Updated 9 months ago
• VolkerH / Lattice_Lightsheet_Deskew_Deconv
  Open-source, GPU accelerated code for deskewing and deconvolving lattice light sheet data
  ☆25Updated 4 years ago
• tlambert03 / napari-ndtiffs
  A napari plugin to load & deskew folders of lattice light sheet TIFFs
  ☆13Updated last month
• neurobiology-ut / PHILOW
  Python-based Human-In-the-LOop Workflow: PHILOW is an interactive deep learning-based platform for 3D datasets
  ☆26Updated 3 months ago
• lukasz-migas / napari-plot
  1d plotting in napari-based canvas.
  ☆26Updated this week
• abcucberkeley / PetaKit5D
  ☆41Updated this week
• tlambert03 / LLSpy
  Lattice light-sheet post-processing utility.
  ☆29Updated this week
• guiwitz / naparimovie
  Create movies from series of key-frames in napari.
  ☆38Updated 4 years ago
• pymmcore-plus / useq-schema
  An implementation agnostic schema for describing a sequence of events during a multi-dimensional imaging acquisition.
  ☆19Updated last week
• m-albert / MVRegFus
  Python module for registering and fusing multi-view microscopy data
  ☆23Updated 2 months ago
• PRNicovich / 3D-Printed-Optics-Lab-Parts
  Various parts made for fluorescence microscopy + optics work
  ☆16Updated 5 years ago
• pymmcore-plus / pymmcore-plus
  Pure python/C++ micro-manager ecosystem
  ☆36Updated this week
• scopetools / cudadecon
  GPU accelerated 3D image deconvolution using CUDA
  ☆35Updated 10 months ago
• lowe-lab-ucl / arboretum
  Track and lineage visualization with btrack and Napari
  ☆45Updated 7 months ago
• imagej / napari-imagej
  Use ImageJ functionality from napari
  ☆31Updated 2 months ago
• mesoSPIM / mesoSPIM-control
  Image acquisition software for mesoSPIM light-sheet microscopes.
  ☆42Updated last month
• haesleinhuepf / devbio-napari
  ☆49Updated last month
• MicroscPSF / MicroscPSF-Py
  Fast and Accurate 3D PSF Computation for Fluorescence Microscopy
  ☆42Updated 7 months ago
• tlambert03 / napari-omero
  Browse your OMERO database from within napari.
  ☆37Updated this week
• haesleinhuepf / napari-workflow-optimizer
  Optimize image processing workflows in napari
  ☆17Updated last month
• haesleinhuepf / napari-process-points-and-surfaces
  Process and analyze surfaces using vedo in napari.
  ☆24Updated last year
• haesleinhuepf / napari-segment-blobs-and-things-with-membranes
  A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…
  ☆26Updated last month
• NEUBIAS / training-resources
  Resources for teaching/preparing to teach bioimage analysis
  ☆56Updated last week
• multiview-stitcher / multiview-stitcher
  A toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.
  ☆73Updated this week
• rosalindfranklininstitute / RedLionfish
  ☆29Updated last year