Alternatives and similar repositories for npy2bdv:

Users that are interested in npy2bdv are comparing it to the libraries listed below

• constantinpape / pybdv
  python tools for BigDataViewer
  ☆21Updated last month
• tlambert03 / pycudadecon
  Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy
  ☆61Updated 3 weeks ago
• multiview-stitcher / multiview-stitcher
  A toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.
  ☆61Updated last week
• bigdataprocessor / bigdataprocessor2
  ☆20Updated this week
• mesoSPIM / mesoSPIM-control
  Image acquisition software for mesoSPIM light-sheet microscopes.
  ☆38Updated last month
• haesleinhuepf / apoc
  Accelerated Pixel and Object Classifiers (APOC)
  ☆54Updated 2 years ago
• VolkerH / NapariPlayground
  my first baby steps with Napari
  ☆10Updated 5 years ago
• royerlab / dexp
  Dataset EXploration & Processing
  ☆31Updated last year
• morphometrics / morphometrics
  ☆20Updated last year
• haesleinhuepf / napari-simpleitk-image-processing
  Process images using SimpleITK in napari
  ☆19Updated 3 months ago
• imagej / napari-imagej
  Use ImageJ functionality from napari
  ☆25Updated last month
• QI2lab / OPM
  Control, reconstruction, and analysis code for oblique plane microscopy.
  ☆22Updated this week
• tlambert03 / napari-ndtiffs
  A napari plugin to load & deskew folders of lattice light sheet TIFFs
  ☆12Updated 3 weeks ago
• haesleinhuepf / I2K2022-napari-workshop
  ☆16Updated 2 years ago
• ome / napari-ome-zarr
  A napari plugin for zarr backed OME-NGFF images
  ☆32Updated 3 weeks ago
• haesleinhuepf / napari-process-points-and-surfaces
  Process and analyze surfaces using vedo in napari.
  ☆24Updated 8 months ago
• m-albert / MVRegFus
  Python module for registering and fusing multi-view microscopy data
  ☆23Updated last year
• haesleinhuepf / napari-plot-profile
  ☆17Updated 2 years ago
• sebi06 / napari_zeiss
  Use Napari Viewer to display CZI images
  ☆11Updated 2 years ago
• lacan / microscopy-icons
  Icons describing multiple microscopy techniques, as used by https://www.epfl.ch/research/facilities/ptbiop/equipment/
  ☆11Updated last year
• tlambert03 / imarispy
  Python package for writing 5D numpy arrays to HDF5 files readable by both Imaris and BigDataViewer
  ☆12Updated 3 years ago
• matplotlib / napari-matplotlib
  Linking napari layers with Matplotlib plots
  ☆40Updated this week
• biovoxxel / bv3dbox
  The known BioVoxxel Toolbox functions now improved for 2D and 3D images
  ☆15Updated last month
• CellMigrationLab / Fast4DReg
  Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…
  ☆39Updated last month
• AndrewGYork / high_na_single_objective_lightsheet
  Parts list and build instructions for our high-numerical-aperture lightsheet. Read the publication here: https://andrewgyork.github.io/hi…
  ☆22Updated 7 months ago
• PRNicovich / 3D-Printed-Optics-Lab-Parts
  Various parts made for fluorescence microscopy + optics work
  ☆16Updated 5 years ago
• saalfeldlab / n5-ij
  ImageJ convenience layer for N5
  ☆16Updated last week
• JaneliaSciComp / BigStitcher-Spark
  Running compute-intense parts of BigStitcher distributed
  ☆21Updated this week
• tlambert03 / LLSpy
  Lattice light-sheet post-processing utility.
  ☆27Updated 3 weeks ago
• cmongis / psfj
  PSFj - Know your microscope fluorescence
  ☆21Updated 4 years ago