Alternatives and similar repositories for npy2bdv

Users that are interested in npy2bdv are comparing it to the libraries listed below

• constantinpape / pybdv
  python tools for BigDataViewer
  ☆22Updated 5 months ago
• haesleinhuepf / napari-simpleitk-image-processing
  Process images using SimpleITK in napari
  ☆21Updated last month
• bigdataprocessor / bigdataprocessor2
  ☆21Updated this week
• imagej / napari-imagej
  Use ImageJ functionality from napari
  ☆31Updated 2 months ago
• mesoSPIM / mesoSPIM-control
  Image acquisition software for mesoSPIM light-sheet microscopes.
  ☆42Updated 2 weeks ago
• VolkerH / NapariPlayground
  my first baby steps with Napari
  ☆10Updated 5 years ago
• tlambert03 / LLSpy
  Lattice light-sheet post-processing utility.
  ☆29Updated 3 weeks ago
• CellMigrationLab / Fast4DReg
  Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…
  ☆40Updated 2 months ago
• m-albert / MVRegFus
  Python module for registering and fusing multi-view microscopy data
  ☆23Updated 3 months ago
• haesleinhuepf / apoc
  Accelerated Pixel and Object Classifiers (APOC)
  ☆56Updated 4 months ago
• Euro-BioImaging / BatchConvert
  A nextflow based tool that wraps bfconvert and bioformats2raw to convert image data collections to OME-TIFF and OME-Zarr, respectively, i…
  ☆22Updated 3 months ago
• ome / napari-ome-zarr
  A napari plugin for zarr backed OME-NGFF images
  ☆33Updated 3 weeks ago
• morphometrics / morphometrics
  ☆21Updated last year
• lacan / microscopy-icons
  Icons describing multiple microscopy techniques, as used by https://www.epfl.ch/research/facilities/ptbiop/equipment/
  ☆11Updated 2 years ago
• guiwitz / naparimovie
  Create movies from series of key-frames in napari.
  ☆38Updated 4 years ago
• tlambert03 / pycudadecon
  Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy
  ☆65Updated 3 weeks ago
• tlambert03 / napari-ndtiffs
  A napari plugin to load & deskew folders of lattice light sheet TIFFs
  ☆13Updated 3 weeks ago
• cmongis / psfj
  PSFj - Know your microscope fluorescence
  ☆21Updated 5 years ago
• haesleinhuepf / I2K2022-napari-workshop
  ☆16Updated 2 years ago
• tlambert03 / imarispy
  Python package for writing 5D numpy arrays to HDF5 files readable by both Imaris and BigDataViewer
  ☆12Updated 3 years ago
• napari-threedee / napari-threedee
  A 3D interactivity toolbox for napari
  ☆35Updated 2 months ago
• clEsperanto / napari_pyclesperanto_assistant
  GPU-accelerated general purpose image processing and image analysis in napari
  ☆35Updated last month
• haesleinhuepf / napari-workflow-optimizer
  Optimize image processing workflows in napari
  ☆17Updated last month
• clEsperanto / i2k2020_tutorial_clij_clesperanto
  ☆12Updated 4 years ago
• multiview-stitcher / multiview-stitcher
  A toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.
  ☆74Updated this week
• juglab / napari-n2v
  A self-supervised denoising algorithm.
  ☆26Updated last year
• saalfeldlab / n5-ij
  ImageJ convenience layer for N5
  ☆17Updated 2 weeks ago
• imaris / ImarisWriter
  ☆37Updated last year
• neurobiology-ut / PHILOW
  Python-based Human-In-the-LOop Workflow: PHILOW is an interactive deep learning-based platform for 3D datasets
  ☆26Updated 4 months ago
• micro-manager / pymmcore
  Python bindings for MMCore, Micro-Manager's device control layer
  ☆35Updated last week