funkelab / gunpowder
A library to facilitate machine learning on multi-dimensional images.
☆81Updated 2 months ago
Alternatives and similar repositories for gunpowder:
Users that are interested in gunpowder are comparing it to the libraries listed below
- Block-wise task scheduling for large nD volumes.☆29Updated 4 months ago
- Utils and convenience functions for large-scale bio-image analysis.☆52Updated 3 weeks ago
- Tools for distributed alignment of massive images☆80Updated 2 weeks ago
- Python module for registering and fusing multi-view microscopy data☆23Updated last year
- Accelerated Pixel and Object Classifiers (APOC)☆54Updated 2 weeks ago
- Create movies from series of key-frames in napari.☆37Updated 3 years ago
- Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy☆61Updated last month
- Pythonic and parallelizable I/O for N-dimensional imaging data with OME metadata☆34Updated this week
- A plugin that enables image segmentation provided by Allen Institute for Cell Science☆16Updated last year
- Python-based Human-In-the-LOop Workflow: PHILOW is an interactive deep learning-based platform for 3D datasets☆26Updated 2 weeks ago
- ☆38Updated this week
- Python image segmentation plugin☆31Updated 4 years ago
- 3D/4D volumetric rendering of microscopy data☆21Updated 2 weeks ago
- 🌈☆54Updated last year
- Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.☆35Updated 6 months ago
- StarDist plugin for napari☆37Updated 6 months ago
- Track and lineage visualization with btrack and Napari☆45Updated 4 months ago
- A napari plugin for clustering objects according to their properties.☆82Updated 2 weeks ago
- Scalable Neuroglancer compatible Downsampling, Meshing, Skeletonizing, Contrast Normalization, Transfers and more.☆47Updated this week
- Optimize image processing workflows in napari☆17Updated 2 years ago
- A self-supervised denoising algorithm.☆24Updated 10 months ago
- czi reader from https://www.lfd.uci.edu/~gohlke/code/czifile.py.html☆15Updated 6 years ago
- Process images using SimpleITK in napari☆20Updated 4 months ago
- Dataset EXploration & Processing☆31Updated last year
- Intensify3D is an image normalization tool for large scale fluorescent imaging. It corrects heterogeneities in the signal (defined by the…☆18Updated 3 years ago
- GPU-accelerated general purpose image processing and image analysis in napari☆35Updated 4 months ago
- Cookiecutter for napari plugins☆69Updated 3 months ago
- ☆23Updated 5 months ago
- A 3D interactivity toolbox for napari☆33Updated 3 months ago
- A deep-learning library for denoising images using Noise2Void and friends (CARE, PN2V, HDN etc.), with a focus on user-experience and doc…☆59Updated this week