funkelab / gunpowderLinks
A library to facilitate machine learning on multi-dimensional images.
☆88Updated last week
Alternatives and similar repositories for gunpowder
Users that are interested in gunpowder are comparing it to the libraries listed below
Sorting:
- Block-wise task scheduling for large nD volumes.☆33Updated 10 months ago
- GPU-accelerated general purpose image processing and image analysis in napari☆36Updated 9 months ago
- Utils and convenience functions for large-scale bio-image analysis.☆60Updated last month
- Compose chunk operators to create a pipeline for local or distributed petabyte-scale computation☆55Updated 7 months ago
- Python module for registering and fusing multi-view microscopy data☆24Updated 11 months ago
- A plugin that enables image segmentation provided by Allen Institute for Cell Science☆18Updated 2 months ago
- Cookiecutter for napari plugins☆71Updated last year
- Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy☆71Updated last week
- Tools for handling FIB-SEM data and annotations☆22Updated 10 months ago
- Remap, mask, renumber, unique, and in-place transposition of 3D labeled images. Point cloud too.☆63Updated 2 months ago
- Tools for distributed alignment of massive images☆92Updated this week
- Read and write Neuroglancer datasets programmatically.☆171Updated last week
- Accelerated Pixel and Object Classifiers (APOC)☆59Updated 6 months ago
- Python-based Human-In-the-LOop Workflow: PHILOW is an interactive deep learning-based platform for 3D datasets☆27Updated 11 months ago
- Pythonic and parallelizable I/O for N-dimensional imaging data with OME metadata☆48Updated this week
- A 3D interactivity toolbox for napari☆37Updated 7 months ago
- Create movies from series of key-frames in napari.☆38Updated 4 years ago
- Python image segmentation plugin☆31Updated 5 years ago
- High quality visualization for volumetric image data☆56Updated this week
- A napari plugin for clustering objects according to their properties.☆90Updated 2 weeks ago
- napari plugin for cellpose (see www.cellpose.org) - an anatomical segmentation tool☆61Updated last year
- Optimize image processing workflows in napari☆17Updated 9 months ago
- Block-wise operations for large nD volumes☆43Updated last week
- Automated Segmentation of cellular substructures in Electron Microscopy☆18Updated 2 weeks ago
- A napari plugin for making animations☆95Updated last week
- TensorFlow Deconvolution for Microscopy Data☆91Updated 3 years ago
- Lazily load multiscale whole-slide images with openslide and dask☆34Updated 3 years ago
- Resources for teaching/preparing to teach bioimage analysis☆58Updated this week
- GPU-accelerated, OpenCL-based Random Forest Classifiers for pixel and labeled object classification in napari.☆45Updated 9 months ago
- Scalable Optical Flow-based Image Montaging and Alignment☆87Updated 2 weeks ago