bigdataviewer / bigdataviewer-coreLinks
ImgLib2-based viewer for registered SPIM stacks and more
☆41Updated last week
Alternatives and similar repositories for bigdataviewer-core
Users that are interested in bigdataviewer-core are comparing it to the libraries listed below
Sorting:
- Helpers to use BigDataViewer as a quick visualization tool in other projects.☆25Updated last year
- Fiji plugins for starting BigDataViewer and exporting data.☆22Updated 4 months ago
- ☆111Updated 3 weeks ago
- ImgLib2/BDV implementation of Stitching for large datasets☆78Updated 2 months ago
- ☆20Updated this week
- Generate markdown notebooks from ImageJ Macro☆26Updated 4 years ago
- Home of the ImageJ BAR: A collection of Broadly Applicable Routines for ImageJ☆25Updated 3 years ago
- ABBA - Aligning Big Brains and Atlases (2D sections to 3D atlas registration)☆56Updated last month
- Wrappers for external software calls (Cellpose, Elastix, Ilastix...) and java utilities (object conversions and display)☆40Updated last month
- Create 3D/4D animations using a natural language-based syntax☆61Updated 7 months ago
- ImageJ convenience layer for N5☆19Updated 2 months ago
- Running compute-intense parts of BigStitcher distributed☆28Updated last week
- GPU-accelerated image processing for everyone☆55Updated last year
- sciview is a tool for visualization and interaction with ND image and mesh data☆72Updated last week
- A tool for manual pointwise deformable registration using bigdataviewer.☆34Updated last month
- ClearVolume is a real-time live 3D visualization library designed for high-end volumetric microscopes such as SPIM and DLSM microscopes. …☆46Updated 11 months ago
- The framework for quantification of neuronal anatomy☆55Updated last week
- Friendly base POM for all SciJava-based software☆28Updated last month
- Reconstruct big images from overlapping tiled images on a Spark cluster.☆34Updated 2 years ago
- Janelia Workstation☆25Updated last month
- Feature extraction for labeled objects in images using regionprops from scikit-image☆55Updated 8 months ago
- CLIJ is deprecated. Visit CLIJ2☆56Updated 4 years ago
- How to use Aligning Big Brains and Atlases with Python☆14Updated 2 years ago
- Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…☆40Updated 8 months ago
- Create movies from series of key-frames in napari.☆38Updated 4 years ago
- MultiModal Big Image Data Sharing and Exploration☆18Updated 3 years ago
- Tools for distributed alignment of massive images☆91Updated last week
- Archived: control, reconstruction, and analysis code for oblique plane microscopy.☆22Updated 9 months ago
- The known BioVoxxel Toolbox functions now improved for 2D and 3D images☆17Updated last month
- python tools for BigDataViewer☆22Updated last year