Alternatives and similar repositories for clij-docs

Users that are interested in clij-docs are comparing it to the libraries listed below

• bene51 / 3Dscript
  Create 3D/4D animations using a natural language-based syntax
  ☆61Updated 8 months ago
• haesleinhuepf / napari-simpleitk-image-processing
  Process images using SimpleITK in napari
  ☆23Updated 9 months ago
• JaneliaSciComp / BigStitcher
  ImgLib2/BDV implementation of Stitching for large datasets
  ☆78Updated 3 months ago
• biovoxxel / bv3dbox
  The known BioVoxxel Toolbox functions now improved for 2D and 3D images
  ☆19Updated 2 months ago
• nvladimus / npy2bdv
  Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.
  ☆34Updated last year
• tlambert03 / LLSpy
  Lattice light-sheet post-processing utility.
  ☆30Updated last week
• mobie / mobie
  MultiModal Big Image Data Sharing and Exploration
  ☆18Updated 3 years ago
• apeer-micro / apeer-ometiff-library
  Easily read and write ome-tiff images in python
  ☆28Updated last year
• bigdataprocessor / bigdataprocessor2
  ☆24Updated 4 months ago
• bigdataviewer / bigdataviewer-playground
  ☆20Updated this week
• tlambert03 / pycudadecon
  Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy
  ☆71Updated last week
• clEsperanto / i2k2020_tutorial_clij_clesperanto
  ☆12Updated 5 years ago
• mobie / mobie-viewer-fiji
  ☆41Updated last week
• sverger / SurfCut
  Fiji macro for cutting confocal stacks at various depths relative to surface signal
  ☆10Updated 5 years ago
• saalfeldlab / n5-ij
  ImageJ convenience layer for N5
  ☆19Updated last week
• clij / clij
  CLIJ is deprecated. Visit CLIJ2
  ☆56Updated 4 years ago
• CellMigrationLab / Fast4DReg
  Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…
  ☆40Updated 9 months ago
• DanuserLab / u-shape3D
  Detect morphological motifs, such as blebs, filopodia, and lamellipodia, from 3D images of surfaces, particularly images of cell surfaces…
  ☆31Updated 2 weeks ago
• cmongis / psfj
  PSFj - Know your microscope fluorescence
  ☆24Updated 5 years ago
• allen-cell-animated / agave
  High quality visualization for volumetric image data
  ☆55Updated this week
• saalfeldlab / stitching-spark
  Reconstruct big images from overlapping tiled images on a Spark cluster.
  ☆34Updated 2 years ago
• chanzuckerberg / napari-plugin-alfa-cohort
  Repo for the CZI Imaging Team's napari plugin Alfa Cohort collaboration
  ☆11Updated 4 years ago
• haesleinhuepf / apoc
  Accelerated Pixel and Object Classifiers (APOC)
  ☆59Updated 6 months ago
• constantinpape / pybdv
  python tools for BigDataViewer
  ☆22Updated last year
• QI2lab / OPM
  Archived: control, reconstruction, and analysis code for oblique plane microscopy.
  ☆22Updated 10 months ago
• guiwitz / naparimovie
  Create movies from series of key-frames in napari.
  ☆38Updated 4 years ago
• haesleinhuepf / napari-plot-profile
  ☆20Updated 9 months ago
• UU-cellbiology / ZstackDepthColorCode
  Z-stack Depth Colorcode ImageJ FIJI plugin
  ☆25Updated 3 months ago
• stardist / stardist-napari
  StarDist plugin for napari
  ☆38Updated last year
• abcucberkeley / PetaKit5D
  ☆49Updated 2 months ago