rikenbit / ramdaqLinks
☆13Updated last week
Alternatives and similar repositories for ramdaq
Users that are interested in ramdaq are comparing it to the libraries listed below
Sorting:
- Tool package to perform in-silico CRISPR analysis and assessment☆30Updated last year
- 🧬 MSABrowser: dynamic and fast visualization of sequence alignments, variations, and annotations☆34Updated last year
- Python bindings for the TaxonKit library☆41Updated 2 months ago
- A genome browser in your Jupyter notebook☆31Updated 3 months ago
- A Generative Pre-Trained Transformer Package for Pangenomes☆52Updated 3 months ago
- POC Nextflow pipeline to run the Chai-1, SOTA model for biomolecular structure prediction☆11Updated 7 months ago
- Ultra-fast 5' and 3' demultiplexer☆28Updated last year
- Hybridization probe design for targeted genomic sequencing of diverse and hypervariable viral taxa☆25Updated 2 years ago
- BigSeqKit: a parallel Big Data toolkit to process FASTA and FASTQ files at scale☆56Updated 2 years ago
- Parse GFF3 into Pandas dataframes☆30Updated last year
- A tool for projecting genomic alignments to transcriptomic coordinates☆36Updated last year
- Simple phylogenetic tree visualization python package for phylogenetic analysis☆53Updated 11 months ago
- The RepeatScout 1.0.5, written by Pevzner et al., source code for browsing. The official release and more information are available at h…☆16Updated 2 years ago
- ☆15Updated 2 years ago
- A command line tool to identify and annotate small proteins in microbial sequencing datasets.☆24Updated 2 years ago
- ✂️ Deep learning-based splice site predictor that improves spliced alignments☆54Updated 6 months ago
- FRACTAL: framework for distributed computing to trace large accurate lineages☆24Updated 2 years ago
- Annotating principal splice isoforms☆16Updated 10 months ago
- Bacterial Annotation by Learned Representation of Genes☆58Updated 4 years ago
- ☆21Updated 2 weeks ago
- Find common blocks and differences between DNA sequences☆42Updated 4 months ago
- Learning and Aligning Large Protein Families with support of protein language models.☆27Updated this week
- An insertion caller for Illumina paired-end WGS data.☆23Updated 2 weeks ago
- Cython bindings and Python interface to trimAl, a tool for automated alignment trimming. Now with SIMD!☆27Updated 2 weeks ago
- Cython bindings and Python interface to MUSCLE v5, a highly efficient and accurate multiple sequence alignment software.☆23Updated last year
- Inverted Repeats Finder: a program to analyze DNA and RNA sequences☆19Updated 6 months ago
- Master of Pores 2☆23Updated 9 months ago
- Generation and update of protein families☆19Updated last week
- Taxon Information Query - fast, offline querying of NCBI Taxonomy and related data☆60Updated 11 months ago
- Read, parse and operate different multiple input file formats with OpenVariant☆13Updated 3 months ago