rikenbit / ramdaqLinks
☆13Updated 2 months ago
Alternatives and similar repositories for ramdaq
Users that are interested in ramdaq are comparing it to the libraries listed below
Sorting:
- Tool package to perform in-silico CRISPR analysis and assessment☆32Updated last month
- Python bindings for the TaxonKit library☆40Updated 3 months ago
- A Quality Control filter and parser for NCBI BLAST XML results.☆17Updated 5 years ago
- BigSeqKit: a parallel Big Data toolkit to process FASTA and FASTQ files at scale☆56Updated 2 years ago
- 🧬 MSABrowser: dynamic and fast visualization of sequence alignments, variations, and annotations☆35Updated last year
- Parse GFF3 into Pandas dataframes☆30Updated last year
- A tool for projecting genomic alignments to transcriptomic coordinates☆36Updated last year
- A genome browser in your Jupyter notebook☆31Updated 5 months ago
- Super-fast and accurate demultiplexing of direct RNA-seq runs.☆17Updated 3 months ago
- ☆21Updated 2 weeks ago
- Inverted Repeats Finder: a program to analyze DNA and RNA sequences☆20Updated 8 months ago
- The RepeatScout 1.0.5, written by Pevzner et al., source code for browsing. The official release and more information are available at h…☆16Updated 2 years ago
- Cython bindings and Python interface to trimAl, a tool for automated alignment trimming. Now with SIMD!☆27Updated last month
- ☆15Updated 2 years ago
- FRACTAL: framework for distributed computing to trace large accurate lineages☆24Updated 3 years ago
- Cython bindings and Python interface to MUSCLE v5, a highly efficient and accurate multiple sequence alignment software.☆23Updated last year
- Taxon Information Query - fast, offline querying of NCBI Taxonomy and related data☆60Updated last year
- Nanopore Plasmid Sequencing☆34Updated 2 years ago
- create a interactive coverage plot dashboard from bam files and add gb, vcf and bed tracks☆54Updated 2 months ago
- A pipeline to run and systematically evaluate Multiple Sequence Alignment (MSA) methods.☆38Updated last week
- Improved Inference of Ortholog Groups using Hidden Markov Models☆37Updated last month
- POC Nextflow pipeline to run the Chai-1, SOTA model for biomolecular structure prediction☆11Updated 9 months ago
- ☆27Updated 5 years ago
- Ultra-fast 5' and 3' demultiplexer☆28Updated last year
- Nail is an Alignment Inference tooL☆52Updated last week
- Generation and updating of protein families☆21Updated last week
- Learning and Aligning Large Protein Families with support of protein language models.☆28Updated this week
- Realtime base modification frequency tool☆12Updated last month
- Hybridization probe design for targeted genomic sequencing of diverse and hypervariable viral taxa☆25Updated 2 years ago
- Simple phylogenetic tree visualization python package for phylogenetic analysis☆55Updated last year