simple program to rotate a circular sequence to start at a given position or string
☆22Jul 9, 2023Updated 3 years ago
Alternatives and similar repositories for rotate
Users that are interested in rotate are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- a GFA toolkit☆13Oct 4, 2024Updated 2 years ago
- ONEcode package to replace SAM/BAM, especially for eDNA mapping to everything☆20Aug 17, 2026Updated 2 months ago
- Collection of tools and resources for linked-reads☆13Jun 26, 2026Updated 3 months ago
- GFA visualizer, GPU-accelerated using Vulkan☆80Aug 2, 2022Updated 4 years ago
- A plant organellar Graphical Fragment Assembly toolkit☆17Sep 24, 2026Updated 3 weeks ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A tool to construct repeats directly from raw reads☆17May 29, 2021Updated 5 years ago
- Novel Adjacency Identification with Barcoded Reads☆13Apr 19, 2022Updated 4 years ago
- ☆11Aug 2, 2025Updated last year
- a tool to filter sites in a FASTA-format whole-genome pseudo-alignment☆67Jun 16, 2025Updated last year
- Dynamic programming for aa-to-nt alignment with affine gap, splicing and frameshift☆19Sep 30, 2024Updated 2 years ago
- Site frequency spectrum estimation based on window expectation-maximisation algorithm☆17May 19, 2023Updated 3 years ago
- syncmer graphs, and perhaps other sorts of sequence graphs☆49Updated this week
- ☆27Jun 16, 2026Updated 4 months ago
- Tetemer, an R package and Shiny app for interactively fitting population parameters to k-mer spectra of diploids, triploids, and tetraplo…☆16Jul 30, 2026Updated 2 months ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- A python script for finding telomeric repeats (TTAGGG/CCCTAA) in FASTA files☆38Jun 6, 2022Updated 4 years ago
- Converting and demultiplexing of PacBio BAM files into gzipped fasta and fastq files.☆40Mar 14, 2023Updated 3 years ago
- chloroplast genome assembly using long reads data☆18Jul 8, 2025Updated last year
- Diploid genome assembly analysis tools☆14Sep 19, 2024Updated 2 years ago
- Plasmid analysis using rearrangement distances☆56Jul 19, 2026Updated 2 months ago
- ☆15Jul 21, 2022Updated 4 years ago
- Identifying large scale inversions between two genomes by mapping genome 1's unique kmers onto genome 2.☆10Jun 6, 2025Updated last year
- Fast Tandem Repeat Finder☆19Aug 9, 2026Updated 2 months ago
- de Bruijn graph cOrrectiOn from graph aLignment☆11Jul 20, 2020Updated 6 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Resources for the Col-CEN reference genome assemblies☆12Feb 15, 2022Updated 4 years ago
- ☆11Jan 8, 2026Updated 9 months ago
- An integrated database for improving taxonomic classification of 16S Ribosomal RNA sequences.☆19May 30, 2023Updated 3 years ago
- HiFi error modeler and simulator with ploidy☆12Feb 12, 2026Updated 8 months ago
- variation discovery using long range information in linked-reads☆15Oct 5, 2021Updated 5 years ago
- Fast DNA search and [host] depletion using minimizers☆127Oct 2, 2026Updated 2 weeks ago
- A tool for the recovery of unassembled telomeres from soft-clipped read alignments.☆58Oct 9, 2026Updated last week
- ☆33Oct 9, 2026Updated last week
- Naive PCA for genotype data☆10Jul 27, 2016Updated 10 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- cobraa (coalescent based reconstruction of ancient admixture): a hidden Markov model to infer ghost admixture using just a diploid sequen…☆26Jun 17, 2025Updated last year
- Identify and find telomeres, or telomeric repeats in a genome.☆178Oct 10, 2026Updated last week
- sfasta☆35Feb 25, 2026Updated 7 months ago
- find likely coding segments in DNA using composition-normalised hexamer tables☆18Oct 18, 2024Updated 2 years ago
- ☆16Jul 25, 2021Updated 5 years ago
- Genome alignment and synteny plots☆36Mar 24, 2026Updated 6 months ago
- Annotation of cryptic transposon variants using Hidden Markov Models to detect conserved terminal features.☆10Updated this week