refresh-bio / DSRC
DSRC - DNA Sequence Reads Compressor
☆56Updated 2 years ago
Alternatives and similar repositories for DSRC:
Users that are interested in DSRC are comparing it to the libraries listed below
- 10x Genomics Reads Simulator☆45Updated last year
- A program to detect denovo-variants using next-generation sequencing data.☆51Updated 4 years ago
- Structural Variant Prediction Viewer☆34Updated 7 years ago
- Read visualizer for structural variants☆81Updated 6 years ago
- MetaSV: An accurate and integrative structural-variant caller for next generation sequencing☆55Updated 7 years ago
- UCSC Nanopore☆43Updated 5 years ago
- A simple toolset for BED files (warning: CLI may change before bedtk becomes stable)☆137Updated 8 months ago
- Adaptive semi-global banded alignment on string graphs☆65Updated 6 years ago
- LoFreq Star: Sensitive variant calling from sequencing data☆103Updated 2 years ago
- FermiKit small variant calls for public SGDP samples☆17Updated 8 years ago
- SV detection from paired end reads mapping☆38Updated 14 years ago
- Adapter trimming and virtual library creation for Illumina Nextera Mate Pair libraries.☆54Updated 6 years ago
- Support Vector Structural Variation Genotyper☆58Updated 4 years ago
- Structural variant caller☆54Updated 3 years ago
- An awk-like VCF parser☆56Updated last year
- A collection of command line tools for working with sequencing data☆51Updated this week
- Assembly Based ReAligner☆72Updated 6 years ago
- The CHM1-NA12878 benchmark for single-sample SNP/INDEL calling from WGS Illumina data☆30Updated 7 years ago
- SiNVICT: Ultra-Sensitive Detection of Single Nucleotide Variants and Indels in Circulating Tumour DNA☆27Updated 4 years ago
- Filtering and profiling of next-generational sequencing data using region-specific rules☆25Updated 8 years ago
- Edinburgh Genomics MinION training 2016☆33Updated 8 years ago
- Filtering and profiling of next-generational sequencing data using region-specific rules☆75Updated last year
- ☆79Updated 9 months ago
- High-performance error correction for Illumina resequencing data☆69Updated 8 years ago
- Very simple, pure python, BAM file reader☆79Updated 6 years ago
- heuristics to merge structural variant calls in VCF format.☆36Updated 8 years ago
- ☆53Updated 4 years ago
- Long read alignment analysis. Generate a reports on sequence alignments for mappability vs read sizes, error patterns, annotations and r…☆47Updated 6 years ago
- Repo for the software suite ShoRAH (Short Reads Assembly into Haplotypes)☆40Updated last year
- Utilities to create and analyze gVCF files☆39Updated 7 years ago