refresh-bio / DSRCLinks
DSRC - DNA Sequence Reads Compressor
☆60Updated 3 years ago
Alternatives and similar repositories for DSRC
Users that are interested in DSRC are comparing it to the libraries listed below
Sorting:
- Assembly Based ReAligner☆74Updated 7 years ago
- An illumina paired-end and mate-pair short read simulator. This project attempts to model as many of the quirks that exist in Illumina da…☆68Updated 11 years ago
- A program to detect denovo-variants using next-generation sequencing data.☆55Updated 5 years ago
- Read visualizer for structural variants☆84Updated 7 years ago
- MetaSV: An accurate and integrative structural-variant caller for next generation sequencing☆59Updated 8 years ago
- Tools and software library developed by the ONT Applications group☆64Updated 5 years ago
- A method to identify structural variation from sequencing data in target regions☆32Updated 5 years ago
- Estimating k-mer coverage histogram of genomics data☆77Updated 2 years ago
- High-performance error correction for Illumina resequencing data☆74Updated 9 years ago
- adds sample names and read-group (RG) tags to BAM alignments☆51Updated 5 years ago
- 10x Genomics Reads Simulator☆46Updated 2 years ago
- Adapter trimming and virtual library creation for Illumina Nextera Mate Pair libraries.☆52Updated 7 years ago
- ☆55Updated 5 years ago
- Filtering and profiling of next-generational sequencing data using region-specific rules☆79Updated 2 years ago
- Very simple, pure python, BAM file reader☆79Updated 6 years ago
- A C library for handling bigWig files☆81Updated last year
- Method for detecting STR expansions from short-read sequencing data☆63Updated 4 years ago
- RetroSeq is a bioinformatics tool that searches for mobile element insertions from aligned reads in a BAM file and a library of reference…☆67Updated 3 years ago
- ☆78Updated 11 years ago
- Workflows used for WGS data processing -- replaced by https://github.com/gatk-workflows/gatk4-genome-processing-pipeline☆57Updated 6 years ago
- Standalone C library for assembling Illumina short reads in small regions☆72Updated 3 years ago
- utilities for working with IGV: opening files remotely in either desktop IGV or a web viewer (igv.js), creating screenshots, etc.☆49Updated 6 years ago
- A collection of command line tools for working with sequencing data☆52Updated last week
- Flexible genotype query among 30,000+ samples whole-genome☆94Updated 6 years ago
- A simple toolset for BED files (warning: CLI may change before bedtk becomes stable)☆143Updated 5 months ago
- Support Vector Structural Variation Genotyper☆58Updated 5 years ago
- VarSim: A high-fidelity simulation validation framework for high-throughput genome sequencing with cancer applications☆90Updated last year
- GEM-Mapper v3☆58Updated 2 months ago
- A C++ header-only library for reading Oxford Nanopore Fast5 files☆53Updated 3 years ago
- 10x Genomics Linked-Read Diploid De Novo Assembler☆65Updated 7 years ago