A high performance and compression ratio compressor for genomic data, powered by GTXLab of Genetalks.
☆170Apr 18, 2022Updated 4 years ago
Alternatives and similar repositories for gtz
Users that are interested in gtz are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A fast lossless FASTQ compressor with ultra-high compression ratio☆148May 28, 2025Updated 11 months ago
- A flexible framework for rapid genome analysis and interpretation☆319Oct 18, 2022Updated 3 years ago
- A Lossy compressor for Quality Scores in Genomic Data☆12Oct 4, 2016Updated 9 years ago
- wgs_pipeline☆18Dec 3, 2013Updated 12 years ago
- A modern compressor for genomic files (FASTQ, SAM/BAM/CRAM, VCF, FASTA, GFF/GTF/GVF, 23andMe...), up to 5x better than gzip and faster to…☆182Apr 14, 2026Updated 2 weeks ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- The next version of bwa-mem☆830Oct 15, 2025Updated 6 months ago
- Quality control on genetic variants from next-generation sequencing data using random forest☆20May 26, 2022Updated 3 years ago
- Fastq compression tool☆17Dec 2, 2019Updated 6 years ago
- HGVS variant nomenclature checker☆99May 1, 2023Updated 3 years ago
- A tool to infer TF regulators for gene modules.☆10May 11, 2021Updated 4 years ago
- lumpy: a general probabilistic framework for structural variant discovery☆342Feb 22, 2026Updated 2 months ago
- Command line tools for CMDB varaints browser☆23May 14, 2024Updated last year
- FxTools: a comprehensive toolkit for FASTA and FASTQ file manipulation☆31Feb 16, 2022Updated 4 years ago
- Next generation sequencing reads de novo assembler.☆240Sep 20, 2025Updated 7 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- software tools for haplotype assembly from sequence data☆231Feb 9, 2025Updated last year
- Generate duplex/single consensus reads to reduce sequencing noises and remove duplications☆127Oct 27, 2023Updated 2 years ago
- DSRC - DNA Sequence Reads Compressor☆60May 20, 2022Updated 3 years ago
- xHLA: Fast and accurate HLA typing from short read sequence data☆115Oct 13, 2023Updated 2 years ago
- Official code repository for GATK versions 4 and up☆1,942Updated this week
- Golang for Bioinformatics☆32Aug 16, 2016Updated 9 years ago
- An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)☆2,351Apr 24, 2026Updated last week
- Workflows for germline short variant discovery with GATK4☆141May 7, 2021Updated 4 years ago
- FQSqueezer - FASTQ compressor based on k-mer statistics☆17Feb 24, 2024Updated 2 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- ☆20Feb 24, 2017Updated 9 years ago
- A 10x faster version base on official trimmomatic. The results of trimmomatic-pigz are exactly the same with official trimmomatic.☆16Nov 20, 2024Updated last year
- Control-FREEC: Copy number and genotype annotation in whole genome and whole exome sequencing data☆178Aug 22, 2024Updated last year
- Utilities to detect and profile `het-kmers`☆12Aug 5, 2024Updated last year
- BWA-MEME: Faster BWA-MEM2 using learned-index☆137Mar 25, 2026Updated last month
- Tools for working with SAM/BAM data☆610Dec 22, 2024Updated last year
- Compressing next-generation sequencing data with extreme prejudice.☆83May 31, 2022Updated 3 years ago
- MiXCR is an ultimate software platform for analysis of Next-Generation Sequencing (NGS) data for immune profiling.☆388Apr 22, 2026Updated last week
- VCF-kit: Assorted utilities for the variant call format☆134Jul 10, 2025Updated 9 months ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- ☆32Dec 16, 2022Updated 3 years ago
- Readability enhancement tool for bioinformatics data file format☆29Jan 9, 2020Updated 6 years ago
- A simple toolset for BED files (warning: CLI may change before bedtk becomes stable)☆144Aug 24, 2025Updated 8 months ago
- Falcon Accelerated Genomics Pipelines☆15Oct 1, 2019Updated 6 years ago
- 天津医科大学，本科选修课，《故事中的统计学》课程资料☆33Mar 25, 2026Updated last month
- An analysis of Arabidopsis RNA-seq data (hy5 mutant and wt, two replicates each; SRA accession SRX029582)☆16Jul 3, 2012Updated 13 years ago
- A versatile pairwise aligner for genomic and spliced nucleotide sequences☆2,166Apr 25, 2026Updated last week