A pipeline for homology based annotation utilizing exon structural conservation
☆10Mar 13, 2022Updated 4 years ago
Alternatives and similar repositories for HAPpy-ABCENTH
Users that are interested in HAPpy-ABCENTH are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆23Jan 29, 2024Updated 2 years ago
- Annotate Olfactory receptor CDS from genome☆11Apr 29, 2023Updated 3 years ago
- Automatically exported from code.google.com/p/prank-msa☆41Mar 19, 2026Updated 6 months ago
- ☆14Oct 11, 2026Updated last week
- VolcanoSV enables accurate and robust structural variant calling in diploid genomes from single-molecule long read sequencing☆10Sep 8, 2026Updated last month
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- FulQuant pipeline to identify and quantify transcript isoforms based on Nanopore long-read data☆10Jul 20, 2022Updated 4 years ago
- A filter algorithm with program to filter an alignment or mapping file☆12May 15, 2025Updated last year
- GFF toolkit☆17May 23, 2026Updated 4 months ago
- PHasing Reads in Areas Of Homozygosity☆14Feb 12, 2025Updated last year
- ☆13Dec 10, 2025Updated 10 months ago
- Convergence analysis using relative rate and correcting for phylogenetic relatedness☆12Apr 25, 2025Updated last year
- Fast Tandem Repeat Finder☆19Aug 9, 2026Updated 2 months ago
- Hybrid error correction approach for long reads using overlap graph☆11Sep 26, 2023Updated 3 years ago
- Identifying large scale inversions between two genomes by mapping genome 1's unique kmers onto genome 2.☆10Jun 6, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A command line tool (in Kotlin/JVM) for intuitively visualizing BAM alignments. (Currently unmaintained)☆11Jan 7, 2024Updated 2 years ago
- Fast and haplotype-aware assembler☆16Oct 2, 2026Updated 2 weeks ago
- Fully automatic k-mer based polishing for genome assemblies. Based on original concept and design from Ivan Sovic, Ann McCartney, and Ara…☆11Mar 16, 2026Updated 7 months ago
- Classify chimeric reads based on unique kmer contents☆14Aug 30, 2026Updated last month
- The complete sequence of a Chinese individual☆14Oct 8, 2024Updated 2 years ago
- ☆12Jul 1, 2026Updated 3 months ago
- ☆13Nov 15, 2017Updated 8 years ago
- a precise pangenome browser combining linear and graph-based pan-genome☆13Jul 16, 2024Updated 2 years ago
- The tool is employed for the visualisation of genome-wide contact heatmaps.☆14Apr 14, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆11Jun 2, 2025Updated last year
- Phylogenetic profiling with orthology data☆14Updated this week
- Plotting average TAD heatmap for Hi-C data (give TAD segmentation and cool/hiclib interactions map).☆10Jun 5, 2021Updated 5 years ago
- ☆12Jun 7, 2024Updated 2 years ago
- convert CHAIN format to PAF format☆15Dec 17, 2024Updated last year
- convert alignment bam to pairwise alignment or multiple sequence alignment (msa) at genome specific region☆13May 21, 2024Updated 2 years ago
- ☆10Feb 18, 2025Updated last year
- NeSSie library and tool for the analysis of elements of sequence symmetry in nucleic-acids☆13Jun 26, 2018Updated 8 years ago
- Nanopore Real-Time Analysis Tool☆17Sep 4, 2024Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- lace up GFA files using panSN path name sub-ranges to coordinate the lacing☆14Jul 30, 2025Updated last year
- ☆13Sep 11, 2025Updated last year
- Genomics 3D Visualizer☆14Jun 14, 2024Updated 2 years ago
- Allele-specific modeling of diploid Hi-C data☆12May 6, 2021Updated 5 years ago
- Pipelines for using T2T genome as a reference☆15Dec 11, 2024Updated last year
- Genome-Genome circle synteny☆25Oct 9, 2026Updated last week
- Figures for the CHM13 T2T SD paper.☆12Sep 12, 2021Updated 5 years ago