AliciaMstt / BioinfInvRepro2017-II
Repositorio de apuntes y código del curso Introducción a la bioinformática e investigación reproducible para análisis genéticos del semestre 2017-II
☆12Updated 7 years ago
Related projects ⓘ
Alternatives and complementary repositories for BioinfInvRepro2017-II
- repositorio de apuntes y código del curso "Introducción a la bioinformática e investigación reproducible para análisis genéticos"☆31Updated 4 years ago
- Taller práctico de bioinformática Posgrado en Ciencias Biológicas UNAM☆17Updated 3 years ago
- Sydney Phylogenetics Workshop☆62Updated 4 months ago
- Curso de introducción a la bioinformática e investigación reproducible☆25Updated 3 years ago
- R tools for reconstructing metabolisms.☆14Updated this week
- Various customs functions written to enhance the base functions of phyloseq. Most of them are used in the formation "Métagénomique 16S" p…☆33Updated last year
- r package for post-clustering curation of amplicon next generation sequencing data (metabarcoding)☆63Updated 11 months ago
- Talleres Internacionales de Bioinformática - Centro de Ciencias Genómicas, UNAM, Cuernavaca, México☆20Updated this week
- JAMP - Just Another Metabarcoding Pipeline☆32Updated 2 years ago
- MJOLNIR Metabarcoding Joining Obitools & Linkage Networks In R☆17Updated 4 months ago
- R package for microbiome data visualization and statistics. Uses phyloseq, vegan and the tidyverse. Docker image available.☆106Updated this week
- metabaR is an R package to curate and visualise DNA metabarcoding data after basic bioinformatics analyses.☆13Updated last year
- Materials and presentations for the 2021 ISB Virtual Microbiome Series.☆25Updated last year
- The Microbiome Explorer provides methods to analyze and visualize microbial community sequencing data either from the R command line or t…☆69Updated 2 years ago
- Import qiime2 artifacts to R☆156Updated 4 months ago
- Various functions for analysis of microbial community data☆41Updated 2 years ago
- A primer for computational tools to analyze genetics of populations in R☆85Updated 3 years ago
- This repository contains CO1 reference sets that can be used with the RDP Classifier, BLAST, or SINTAX to classify COI metabarcode sequen…☆31Updated last year
- A list of R environment based tools for microbiome data exploration, statistical analysis and visualization☆111Updated last year
- This repository gives an overview of my teaching activities. Links to slides and data sets are included. Feel free to re-use my content.☆46Updated last month
- Automatically exported from code.google.com/p/jmodeltest2☆75Updated 3 years ago
- Using ggtree to build phylogenetic trees☆45Updated 2 weeks ago
- biodiversity genomics course by Nicol Rueda, Karin Näsvall and Joana Meier from the Wellcome Sanger Institute☆43Updated 2 months ago
- Protist Ribosomal Reference database (PR2) - SSU rRNA gene database☆79Updated last year
- A python package to query different databases of boldsystems.org☆30Updated 3 weeks ago
- A dynamic database of fungal trait measurements☆71Updated 4 years ago
- [deprecated] Please use ampvis2☆8Updated 7 years ago
- A robust and fast clustering method for amplicon-based studies☆31Updated last year
- This repo collects the list of podcasts related to microbiome science: science, microbiology and bioinformatics.☆21Updated last month
- An efficient and objective tool for optimizing microbiome rRNA gene trimming parameters☆81Updated 4 months ago