borenstein-lab / multi_view_integration_analysisLinks
☆12Updated last year
Alternatives and similar repositories for multi_view_integration_analysis
Users that are interested in multi_view_integration_analysis are comparing it to the libraries listed below
Sorting:
- This is the supplementary code for CRC-multi-kingdom☆17Updated 3 years ago
- ☆18Updated 2 years ago
- Batch effects removal for microbiome data via conditional quantile regression☆31Updated 3 years ago
- A script to make downloading of SRA/GEO data easier☆31Updated last year
- Multi-omics multi-layered network integration and interpretation☆14Updated 11 months ago
- Analysis framework for integrating gut microbiome and host gene expression data☆33Updated 3 years ago
- This repository contains computer codes for main analyses of the manuscript titled 'Multi-omic Landscape of Airway Microbe-Host Interacti…☆33Updated 3 years ago
- ☆14Updated 3 years ago
- Software used to develop the TCMA database associated with 10.1016/j.chom.2020.12.001.☆12Updated last year
- 16S rRNA marker gene upstream and dowstream analysis tutorial for the UCT Hex cluster.☆11Updated 4 years ago
- Identifying genome-wide translated open reading frames using ribosome profiling☆23Updated 2 years ago
- Benchmarking long-read RNA-seq analysis tools☆27Updated 7 months ago
- Time-Course Multi-Omics data integration☆25Updated last year
- A R script to perform clustering of gene expression time-series RNA-seq data with Mfuzz.☆22Updated 6 years ago
- Professional Comprehensive Omics Data Analysis☆23Updated 3 months ago
- R package to predict microbial loads☆16Updated 3 months ago
- Codes and sample data supporting the Dutch Microbiome Project. The preprint is currently available at https://www.biorxiv.org/content/10.…☆34Updated 4 years ago
- Computational framework to identify promoter sequences from RNA-seq datasets☆10Updated last year
- A continually expanding collection of RNA-seq tools☆51Updated 11 months ago
- ChIP-seq pipeline tool for quality check, normalization, statistical analysis, and visualization of multiple ChIP-seq samples.☆24Updated 2 months ago
- A shiny package for microbiome functional enrichment analysis☆36Updated 5 months ago
- A networks analysis pipeline for RNASeq time series data☆14Updated 4 years ago
- 将速铂下载工具进行封装,以便高效方便地批量下载SRA测序数据。☆10Updated 5 years ago
- ☆27Updated 2 years ago
- ☆34Updated last year
- pathway based data integration and visualization☆41Updated 5 months ago
- Rapid analysis and visualisation for bulk RNA-seq, psuedo-bulk RNA-seq, GeoMx and Proteomic datasets.☆30Updated last year
- Bioinformatic tool for Splice site Strength Estimation using RNA-seq☆18Updated last month
- Build Annotation package by using information from KEGG, NCBI, Ensembl☆15Updated 2 years ago
- Metagenome analysis using the Kraken software suite☆33Updated 2 years ago