qiita-spots / qiitaLinks
Qiita - A multi-omics databasing effort
☆128Updated 3 weeks ago
Alternatives and similar repositories for qiita
Users that are interested in qiita are comparing it to the libraries listed below
Sorting:
- ☆76Updated 5 years ago
- PAired-eND Assembler for DNA sequences☆137Updated 5 years ago
- Statistical Analysis of Metagenomic Profiles☆94Updated last week
- an interactive viewer for populations of bacterial genomes linked by a phylogeny☆129Updated last year
- Convert various sequence formats to FASTA☆146Updated last month
- A user-friendly workflow for phylogenomics☆225Updated this week
- Recentrifuge: robust comparative analysis and contamination removal for metagenomics☆99Updated 3 weeks ago
- In this repo you will find demos and tutorials prepared by members of the CBIB. Feel free to use them for non-commercial activities given…☆84Updated 7 years ago
- Processing pipeline for pan-genome visulization and exploration☆143Updated 2 years ago
- VirFinder: a novel k-mer based tool for identifying viral sequences from assembled metagenomic data☆137Updated 5 years ago
- Best-fit model selection☆87Updated last year
- A tutorial on methods of 16S analysis with QIIME 1☆71Updated 6 years ago
- Curated Metagenomic Data of the Human Microbiome☆150Updated last week
- Short Read Sequence Typing for Bacterial Pathogens☆145Updated 4 years ago
- Phylogenetic Investigation of Communities by Reconstruction of Unobserved STates (PICRUST): Official repository for software and unit tes…☆91Updated 5 months ago
- Practical, reusable scripts for bioinformatics☆102Updated 6 years ago
- GET_HOMOLOGUES: a versatile software package for pan-genome analysis☆123Updated 3 weeks ago
- Software for aligning viewing and editing dna/aminoacid sequences, intuitive, fast and lightweight. Download and website:☆147Updated 3 weeks ago
- breseq is a computational pipeline for finding mutations relative to a reference sequence using high-throughput DNA resequencing data. It…☆175Updated 2 months ago
- A robust, extensible metagenomics pipeline☆174Updated this week
- motus - a tool for marker gene-based OTU (mOTU) profiling☆167Updated last month
- Current Challenges and Best Practice Protocols for Microbiome Analysis using Amplicon and Metagenomic Sequencing☆123Updated last year
- Download files from NCBI Entrez by accession☆132Updated last year
- Bioinformatics program inStrain☆181Updated 8 months ago
- Source code of the VirSorter tool, also available as an App on CyVerse/iVirus (https://de.iplantcollaborative.org/de/)☆101Updated 5 years ago
- FunGAP: fungal Genome Annotation Pipeline☆111Updated 7 months ago
- Modular command-line solution for visualisation, quality control and taxonomic partitioning of genome datasets☆207Updated last year
- 🐙 KrakenUniq: Metagenomics classifier with unique k-mer counting for more specific results☆243Updated 2 years ago
- Pairwise SNP distance matrix from a FASTA sequence alignment☆151Updated last month
- MEGAN Community Edition☆72Updated last year