qczhang / icSHAPE
icSHAPE pipeline
☆29Updated 9 years ago
Alternatives and similar repositories for icSHAPE:
Users that are interested in icSHAPE are comparing it to the libraries listed below
- ☆21Updated 4 years ago
- A Perl/R pipeline for plotting metagenes☆37Updated 3 years ago
- ☆54Updated 3 years ago
- optimization of ribosome P-site positioning in ribosome profiling data☆48Updated this week
- A tool for accurately detecting actively translating ORFs from Ribo-seq data☆36Updated 3 weeks ago
- fork of RSeQC python RNAseq metrics suit of tools☆48Updated 6 years ago
- Public repository for ShapeMapper 2 releases☆32Updated 2 months ago
- Ribo-seq TIS Hunter, predicting translation initiation sites and ORFs using riboseq data☆35Updated 2 months ago
- Allele-specific alignment sorting☆54Updated 2 years ago
- Analysis pipeline for the GUIDE-seq assay.☆77Updated last year
- Single Cell Long Read is a suite of tools dedicated to Cell barcode / UMI assignment and analysis of highly multiplexed single cell Nanop…☆73Updated last year
- RNA-seq Quantification of Alternative Polyadenylation☆46Updated last year
- A list of alternative splicing analysis resources☆42Updated 3 months ago
- Workflows for processing RNA data for germline short variant discovery with GATK v4 and related tools☆73Updated 3 years ago
- Regression-based annotation of protein-coding sequences from ribosome profiling data☆31Updated 4 years ago
- Tools for analyzing DNA methylation data☆36Updated last week
- Fit-Hi-C is a tool for assigning statistical confidence estimates to chromosomal contact maps produced by genome-wide genome architecture…☆81Updated 2 years ago
- A tool for the calculation of RNA-editing index for RNA seq data☆40Updated last year
- New version of JACUSA -> 2.0☆24Updated 3 weeks ago
- CADD scripts release for offline scoring. For more information about CADD, please visit our website☆76Updated 2 months ago
- Integrative analysis pipeline for pooled CRISPR functional genetic screens☆29Updated last year
- Dynamics analysis of Alternative PolyAdenylation from RNA-seq☆55Updated last year
- HiC uniform processing pipeline☆58Updated last year
- Publication quality NGS track plotting☆111Updated 2 years ago
- ☆40Updated 2 years ago
- Pair-End AssembeR☆30Updated 10 years ago
- Extract data quickly from Juicebox via straw☆67Updated 10 months ago
- A tool for bigWig files.☆119Updated 6 years ago
- Capturing protein-RNA interaction footprints from single-nucleotide CLIP-seq data☆29Updated 3 years ago
- Updated DANPOS2 to work with python3☆21Updated 11 months ago